RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 PPIDQ08752 370 aaKnown RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 ENPP2Q13822 863 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 LRRC32Q14392 662 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 PTPRNQ16849 979 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 INO80DQ53TQ3 878 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 NPNTQ6UXI9 565 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 SFTPA1Q8IWL2 248 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 ATPAF2Q8N5M1 289 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 ACTL9Q8TC94 416 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 ZNF599Q96NL3 588 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 TBC1D17Q9HA65 648 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 PDFQ9HBH1 243 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 THAP10Q9P2Z0 257 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 SAE1Q9UBE0 346 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 PLA2G4CQ9UP65 541 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 BDP1A6H8Y1 2624 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 TCRBV7S2A1N4TA0A589 114 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 HACD1B0YJ81 288 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 PGRMC1O00264 195 aaKnown RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 SNAP91O60641 907 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 ZNF189O75820 626 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 CD160O95971 181 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 GLDCP23378 1020 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 TARSP26639 723 aaKnown RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 OTUD4Q01804 1114 aaKnown RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 FZD5Q13467 585 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 RFTN1Q14699 578 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 SIX1Q15475 284 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 LONRF2Q1L5Z9 754 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 HSF5Q4G112 596 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 TIGD7Q6NT04 549 aaPredicted RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 ZNF354CQ86Y25 554 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 CREG2Q8IUH2 290 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 MRGPRX3Q96LB0 322 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 HOMER3Q9NSC5 361 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 SLC25A13Q9UJS0 675 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 HCN2Q9UL51 889 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 NDRG2Q9UN36 371 aaKnown RBP11.82□□□□□ -0.52
SCN9A-204ENST00000452182 ERVW-1Q9UQF0 538 aa11.82□□□□□ -0.52
SCN9A-204ENST00000452182 FAM170BA6NMN3 283 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 J3KR12 359 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 ZNF185O15231 689 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 MAP3K6O95382 1288 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 PEX11BO96011 259 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 NNMTP40261 264 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 SERPINH1P50454 418 aaKnown RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 ST8SIA6P61647 398 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 HNRNPDQ14103 355 aaKnown RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 PRKD1Q15139 912 aaPredicted RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 CCNG2Q16589 344 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 DRICH1Q6PGQ1 229 aaPredicted RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 ARHGAP36Q6ZRI8 547 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 TRMT11Q7Z4G4 463 aaKnown RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 SH2D3CQ8N5H7 860 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 ZNF513Q8N8E2 541 aaPredicted RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 NETO2Q8NC67 525 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 PJA1Q8NG27 643 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 KIF18AQ8NI77 898 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 SLC35B2Q8TB61 432 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 USP33Q8TEY7 942 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 TFB1MQ8WVM0 346 aaKnown RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 MAML1Q92585 1016 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 CLDN23Q96B33 292 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 HAUS1Q96CS2 278 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 MYO19Q96H55 970 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 MS4A14Q96JA4 679 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 LGMNQ99538 433 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 CEP44Q9C0F1 390 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 TMEM245Q9H330 911 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 SP110Q9HB58 689 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 MTF2Q9Y483 593 aaPredicted RBP11.81□□□□□ -0.52
SCN9A-204ENST00000452182 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
SCN9A-204ENST00000452182 CHURC1-FNTBB4DL54 471 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 MCF2LO15068 1137 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 MATN3O15232 486 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 MTSS1O43312 755 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 ATP9BO43861 1147 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 RBP3P10745 1247 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 SRCP12931 536 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 RPS9P46781 194 aaKnown RBP11.8□□□□□ -0.52
SCN9A-204ENST00000452182 RENBPP51606 427 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 EIF3EP60228 445 aaKnown RBP11.8□□□□□ -0.52
SCN9A-204ENST00000452182 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 ZNF234Q14588 700 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 UBXN2BQ14CS0 331 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 SLC45A4Q5BKX6 768 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 EMC10Q5UCC4 262 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 EGFLAMQ63HQ2 1017 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 CCDC13Q8IYE1 715 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 CCNYQ8ND76 341 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 CYB5D2Q8WUJ1 264 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 SORCS1Q8WY21 1168 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 NKD2Q969F2 451 aaPredicted RBP11.8□□□□□ -0.52
SCN9A-204ENST00000452182 ISG20Q96AZ6 181 aaKnown RBP11.8□□□□□ -0.52
SCN9A-204ENST00000452182 QKIQ96PU8 341 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCN9A-204ENST00000452182 TUBB2BQ9BVA1 445 aa11.8□□□□□ -0.52
SCN9A-204ENST00000452182 FOXQ1Q9C009 403 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms