RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ARHGAP42A6NI28 874 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 CHURC1-FNTBB4DL54 471 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 SGK1O00141 431 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 DLL1O00548 723 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 KDELR3O43731 214 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 CST8O60676 142 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 GPR37L1O60883 481 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 ADAM23O75077 832 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 MT-CO1P00395 513 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 HLA-EP13747 358 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 PRKCHP24723 683 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 MTAPQ13126 283 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 ENPP2Q13822 863 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 CREG2Q8IUH2 290 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 CHPFQ8IZ52 775 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 CCDC26Q8TAB7 109 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 COG1Q8WTW3 980 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 ACDQ96AP0 544 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 ERLEC1Q96DZ1 483 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 CAPZA3Q96KX2 299 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 DTLQ9NZJ0 730 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 SLC25A13Q9UJS0 675 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 PLA2G4CQ9UP65 541 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 EFR3BQ9Y2G0 817 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 STON1Q9Y6Q2 735 aa13.31□□□□□ -0.28
VPS33A-202ENST00000451053 GOLGA6L10A0A0M3HER8 536 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 TTC34A8MYJ7 566 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 PRR33A8MZF0 331 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 J3KR12 359 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 K7ERQ8 282 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 ZNF185O15231 689 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 SMAD6O43541 496 aaKnown RBP13.3□□□□□ -0.28
VPS33A-202ENST00000451053 CD160O95971 181 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 FGGP02679 453 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 SRPRAP08240 638 aaKnown RBP13.3□□□□□ -0.28
VPS33A-202ENST00000451053 SRCP12931 536 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 PECAM1P16284 738 aaPredicted RBP13.3□□□□□ -0.28
VPS33A-202ENST00000451053 NTSR1P30989 418 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 MAGEA9P43362 315 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 GALNT2Q10471 571 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 TFDP2Q14188 446 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 TMEM31Q5JXX7 168 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 RETSATQ6NUM9 610 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 SERPINA13PQ6UXR4 307 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 BBS12Q6ZW61 710 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
VPS33A-202ENST00000451053 SPEM1Q8N4L4 309 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 LRRN4Q8WUT4 740 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 GABRG3Q99928 467 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 OSBPL8Q9BZF1 889 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 TMEM245Q9H330 911 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 MTG2Q9H4K7 406 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 PDFQ9HBH1 243 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
VPS33A-202ENST00000451053 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 HPCAL4Q9UM19 191 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 HS3ST2Q9Y278 367 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 HEY1Q9Y5J3 304 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 RAD54BQ9Y620 910 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 BDP1A6H8Y1 2624 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 ATG2BQ96BY7 2078 aa13.3□□□□□ -0.28
VPS33A-202ENST00000451053 NUP205Q92621 2012 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 NPC1O15118 1278 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 PRAMEF11O60813 436 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 TJP3O95049 919 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 HOXB2P14652 356 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 VAV1P15498 845 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 ZFXP17010 805 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-202ENST00000451053 COL9A1P20849 921 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 TGM2P21980 687 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 AVPR2P30518 371 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 SERPINH1P50454 418 aaKnown RBP13.29□□□□□ -0.28
VPS33A-202ENST00000451053 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-202ENST00000451053 ST8SIA6P61647 398 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 LONRF2Q1L5Z9 754 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 HSF5Q4G112 596 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-202ENST00000451053 EOGTQ5NDL2 527 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 KIAA1211LQ6NV74 962 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 SLC13A5Q86YT5 568 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-202ENST00000451053 SH2D3CQ8N5H7 860 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 ATPAF2Q8N5M1 289 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 ATP11CQ8NB49 1132 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 KDM1BQ8NB78 822 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 IER2Q9BTL4 223 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 C1QTNF1Q9BXJ1 281 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 SP110Q9HB58 689 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 IPO11Q9UI26 975 aaKnown RBP13.29□□□□□ -0.28
VPS33A-202ENST00000451053 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
VPS33A-202ENST00000451053 A0A1W2PQF6 199 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 TCRBV7S2A1N4TA0A589 114 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 CTAGE15A4D2H0 777 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 ZSCAN5CA6NGD5 496 aaPredicted RBP13.28□□□□□ -0.28
VPS33A-202ENST00000451053 ATP9BO43861 1147 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 MAFKO60675 156 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 ATG13O75143 517 aa13.28□□□□□ -0.28
VPS33A-202ENST00000451053 EPHX1P07099 455 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms