RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 A0A1B0GVM2 712 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 TCAF2A6NFQ2 919 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 FAM170BA6NMN3 283 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 H0Y626 953 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 CHRNB1P11230 501 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 DESP17661 470 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 AMPD1P23109 780 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 CDH6P55285 790 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 NRG1Q02297 640 aaPredicted RBP10.09□□□□□ -0.79
CCDC171-203ENST00000449575 E2F5Q15329 346 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 BOLA3Q53S33 107 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 RABGAP1LQ5R372 815 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 MPP7Q5T2T1 576 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 KCTD16Q68DU8 428 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 C11orf63Q6NUN7 778 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 C8orf74Q6P047 294 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 AADACL2Q6P093 401 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 POLNQ7Z5Q5 900 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 NT5DC3Q86UY8 548 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 CREG2Q8IUH2 290 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 CACNA2D3Q8IZS8 1091 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 TERB1Q8NA31 727 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 XPO6Q96QU8 1125 aaKnown RBP10.09□□□□□ -0.79
CCDC171-203ENST00000449575 ZYG11BQ9C0D3 744 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 KDM4CQ9H3R0 1056 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 NOL6Q9H6R4 1146 aaKnown RBP10.09□□□□□ -0.79
CCDC171-203ENST00000449575 HAUS2Q9NVX0 235 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 RNF14Q9UBS8 474 aa10.09□□□□□ -0.79
CCDC171-203ENST00000449575 DMGDHQ9UI17 866 aaKnown RBP10.09□□□□□ -0.79
CCDC171-203ENST00000449575 C3orf70A6NLC5 250 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-203ENST00000449575 LIN7AO14910 233 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-203ENST00000449575 GLDCP23378 1020 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CSKP41240 450 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 DNA2P51530 1060 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 AIF1P55008 147 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 TPI1P60174 286 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CDH18Q13634 790 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 DPYSL3Q14195 570 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 HADHQ16836 314 aaKnown RBP10.08□□□□□ -0.8
CCDC171-203ENST00000449575 FUT11Q495W5 492 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 FAM182AQ5T1J6 154 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ADIPOR2Q86V24 386 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CCDC105Q8IYK2 499 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 SH2D3CQ8N5H7 860 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CCDC33Q8N5R6 958 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 NPWQ8N729 165 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 PJA1Q8NG27 643 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 FIBINQ8TAL6 211 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 TEKT4Q8WW24 435 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ALG3Q92685 438 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-203ENST00000449575 TBC1D31Q96DN5 1066 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 SPDL1Q96EA4 605 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ALG14Q96F25 216 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ACOX2Q99424 681 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 EBF2Q9HAK2 575 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 PPARGC1AQ9UBK2 798 aaKnown RBP10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ACTL7AQ9Y615 435 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CKAP5Q14008 2032 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 TBC1D3BA6NDS4 549 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 WASH3PC4AMC7 463 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 EEF2KO00418 725 aaKnown RBP10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ZNF185O15231 689 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 OR1E1P30953 314 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CTSOP43234 321 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-203ENST00000449575 SCTRP47872 440 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CDH4P55283 916 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 RIPK1Q13546 671 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 DPYSQ14117 519 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 C2orf27AQ580R0 203 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 GRAMD4Q6IC98 578 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 LRIG3Q6UXM1 1119 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 RFX8Q6ZV50 586 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 OR7D4Q8NG98 312 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CYB5D2Q8WUJ1 264 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CSPG4P5Q96PW8 444 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ALS2CR12Q96Q35 445 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 CALN1Q9BXU9 219 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 KLC2Q9H0B6 622 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 MFSD1Q9H3U5 465 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 EML5Q05BV3 1969 aa10.08□□□□□ -0.8
CCDC171-203ENST00000449575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 TYW5A2RUC4 315 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 LRRD1A4D1F6 860 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 C5orf60A6NFR6 353 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 SNUPNO95149 360 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 MAP3K6O95382 1288 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 ATP6V1G2O95670 118 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 KRT14P02533 472 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 PABPC1P11940 636 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 ERCC2P18074 760 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 ACVRL1P37023 503 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 EIF2DP41214 584 aaKnown RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 SLC1A1P43005 524 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 SEC24CP53992 1094 aa10.07□□□□□ -0.8
CCDC171-203ENST00000449575 ZNF177Q13360 481 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 RNF219Q5W0B1 726 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-203ENST00000449575 MFSD7Q6UXD7 560 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms