RNA–Protein interactions for RNA: ENST00000449538.3

HIST1H2BN-202, Transcript of histone cluster 1 H2B family member n, humanhuman

TSL 1 (best)

Gene HIST1H2BN, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BN-202ENST00000449538 DHX35Q9H5Z1 703 aaKnown RBP17.87■□□□□ 0.45
HIST1H2BN-202ENST00000449538 TMEM74BQ9NUR3 256 aa17.87■□□□□ 0.45
HIST1H2BN-202ENST00000449538 NDFIP2Q9NV92 336 aa17.87■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SUSD2Q9UGT4 822 aa17.87■□□□□ 0.45
HIST1H2BN-202ENST00000449538 FZD4Q9ULV1 537 aa17.87■□□□□ 0.45
HIST1H2BN-202ENST00000449538 CFAP54Q96N23 3096 aa17.87■□□□□ 0.45
HIST1H2BN-202ENST00000449538 A0A1W2PP55 124 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 METTL12A8MUP2 240 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 PATE3B3GLJ2 98 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 C1QTNF3-AMACRE9PGA6 284 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 MCF2LO15068 1137 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 AKR1B10O60218 316 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 BNIP3LO60238 219 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 LRCH4O75427 683 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 RNASEH2AO75792 299 aaKnown RBP17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ZMPSTE24O75844 475 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SEMA4FO95754 770 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 GNSP15586 552 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 GLDCP23378 1020 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ACSL1P33121 698 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 PCK1P35558 622 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 RECQLP46063 649 aaPredicted RBP17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SERPINH1P50454 418 aaKnown RBP17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 GALCP54803 685 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ADKP55263 362 aaKnown RBP17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 PUM1Q14671 1186 aaKnown RBP eCLIP17.86■□□□□ 0.453e-8■□□□□ 10.5
HIST1H2BN-202ENST00000449538 FAM46CQ5VWP2 391 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SNRNP25Q9BV90 132 aaKnown RBP17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 CEP44Q9C0F1 390 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 GPATCH2LQ9NWQ4 482 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 IP6K2Q9UHH9 426 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ANAPC7Q9UJX3 599 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 NENFQ9UMX5 172 aa17.86■□□□□ 0.45
HIST1H2BN-202ENST00000449538 WASH4PA8MWX3 477 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 AKR1B15C9JRZ8 316 aaPredicted RBP17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 K7ERQ8 282 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 EEF2KO00418 725 aaKnown RBP17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 GDF9O60383 454 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 CFIP05156 583 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 GOT1P17174 413 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ACVRL1P37023 503 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ZNF135P52742 658 aaPredicted RBP17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 LIMK1P53667 647 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 YBEYP58557 167 aaPredicted RBP17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 IRX4P78413 519 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ARF5P84085 180 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 DCAF12L1Q5VU92 463 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 C22orf39Q6P5X5 142 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SLC23A3Q6PIS1 610 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ZNF354CQ86Y25 554 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 HDDC3Q8N4P3 179 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 NIPA2Q8N8Q9 360 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 CHD5Q8TDI0 1954 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 CTNNBL1Q8WYA6 563 aaPredicted RBP17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 DNASE2BQ8WZ79 361 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 PEBP4Q96S96 227 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 RTKNQ9BST9 563 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 EDEM2Q9BV94 578 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 RBSNQ9H1K0 784 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 DLL3Q9NYJ7 618 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SLC6A14Q9UN76 642 aa17.85■□□□□ 0.45
HIST1H2BN-202ENST00000449538 LNP1A1A4G5 178 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 MYO1FO00160 1098 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SLC30A4O14863 429 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 DAPK3O43293 454 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SMAD6O43541 496 aaKnown RBP17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SERPINF2P08697 491 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 H2AFZP0C0S5 128 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 TBX2Q13207 712 aaPredicted RBP17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 CA9Q16790 459 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ASTE1Q2TB18 679 aaPredicted RBP17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 BOLA3Q53S33 107 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 H2AFVQ71UI9 128 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 AADATQ8N5Z0 425 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 PCDH20Q8N6Y1 951 aaKnown RBP17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 OR2A12Q8NGT7 310 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ARHGEF26Q96DR7 871 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 CCDC42Q96M95 316 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 NEUROG2Q9H2A3 272 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 C6orf106Q9H6K1 298 aaPredicted RBP17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 RXFP3Q9NSD7 469 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 SERGEFQ9UGK8 458 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 PPM1HQ9ULR3 514 aa17.84■□□□□ 0.45
HIST1H2BN-202ENST00000449538 WDR87Q6ZQQ6 2873 aa17.83■□□□□ 0.45
HIST1H2BN-202ENST00000449538 ZSCAN5CA6NGD5 496 aaPredicted RBP17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 LRRC72A6NJI9 287 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 KDELR3O43731 214 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 PRNPP04156 253 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 MAOBP27338 520 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 CHRNA3P32297 505 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 PARP15Q460N3 678 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 PPP6R3Q5H9R7 873 aaPredicted RBP17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 STPG1Q5TH74 334 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 RFX8Q6ZV50 586 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 CYP4V2Q6ZWL3 525 aaPredicted RBP17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 UMODL1-AS1Q8N2C9 162 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 TMIEQ8NEW7 156 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 PIP4K2CQ8TBX8 421 aa17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
HIST1H2BN-202ENST00000449538 SNX19Q92543 992 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms