RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 FAM114A1Q8IWE2 563 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 APCDD1Q8J025 514 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 IL22RA1Q8N6P7 574 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 GPBAR1Q8TDU6 330 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 NDRG1Q92597 394 aaKnown RBP12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 EDEM1Q92611 657 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 NKD1Q969G9 470 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 EPSTI1Q96J88 318 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 EPAS1Q99814 870 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 DDX50Q9BQ39 737 aaKnown RBP12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 B3GNT4Q9C0J1 378 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 LRRN3Q9H3W5 708 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 GPR27Q9NS67 375 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 GULP1Q9UBP9 304 aa12.94□□□□□ -0.34
AC004540.1-204ENST00000449537 A0A1W2PQM1 296 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 ZNF891A8MT65 544 aaPredicted RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 LMO7DNF2Z398 122 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 MCF2LO15068 1137 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 YY2O15391 372 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 MSI1O43347 362 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 VNN1O95497 513 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 GRNP28799 593 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 RABIFP47224 123 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 C1orf61Q13536 156 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 FGL2Q14314 439 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 RAB41Q5JT25 222 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 PIP5KL1Q5T9C9 394 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 BSPRYQ5W0U4 402 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 KYAT3Q6YP21 454 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 PIGZQ86VD9 579 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 CCDC65Q8IXS2 484 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 SDR16C5Q8N3Y7 309 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 FRS2Q8WU20 508 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 APOBEC4Q8WW27 367 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 TAF4BQ92750 862 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 AZIN2Q96A70 460 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 CCDC74AQ96AQ1 378 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 HEXIM2Q96MH2 286 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 CPEB1Q9BZB8 566 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 PRDM8Q9NQV8 689 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 AGPAT3Q9NRZ7 376 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
AC004540.1-204ENST00000449537 H3BQV1 296 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 ALOX15BO15296 676 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 CAPN5O15484 640 aaPredicted RBP12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 TGFB1I1O43294 461 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 CNTN5O94779 1100 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 LUC7L3O95232 432 aaKnown RBP12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 LIFP15018 202 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 ASPAP45381 313 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 SULT2A1Q06520 285 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 ZFP36L1Q07352 338 aaKnown RBP12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 INCA1Q0VD86 236 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 PDE1CQ14123 709 aaPredicted RBP12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 SEPT6Q14141 434 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 PRRT3Q5FWE3 981 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 NUGGCQ68CJ6 796 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 NADSYN1Q6IA69 706 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 CFAP52Q8N1V2 620 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 ULBP1Q9BZM6 244 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 CDH19Q9H159 772 aa12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 ZFR2Q9UPR6 939 aaKnown RBP12.92□□□□□ -0.34
AC004540.1-204ENST00000449537 TRPM6Q9BX84 2022 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 NYNRINQ9P2P1 1898 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 WIPF3A6NGB9 483 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 NKX2-8O15522 239 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 CLDN1O95832 211 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 BMP15O95972 392 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 PAK4O96013 591 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 SLC8A3P57103 927 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 EIF2B5Q13144 721 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 SPOPLQ6IQ16 392 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 RBFAQ8N0V3 343 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 SCG3Q8WXD2 468 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 MYEOVQ96EZ4 313 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 PRICKLE1Q96MT3 831 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 SLC17A9Q9BYT1 436 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 CYP3A43Q9HB55 503 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 CASS4Q9NQ75 786 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 ABCC13Q9NSE7 274 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 DONSONQ9NYP3 566 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 AKAP7Q9P0M2 348 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 APOBEC3BQ9UH17 382 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 DOLKQ9UPQ8 538 aa12.91□□□□□ -0.34
AC004540.1-204ENST00000449537 TTLL8A6PVC2 850 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 EFCAB7A8K855 629 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 EIF3DO15371 548 aaKnown RBP eCLIP12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 SPINT1O43278 529 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 IGLV3-27P01718 113 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 ITGB7P26010 798 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 NUMBP49757 651 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 CLDN10P78369 228 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 NUCB2P80303 420 aa12.9□□□□□ -0.34
AC004540.1-204ENST00000449537 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms