RNA–Protein interactions for RNA: ENST00000448893.1

RHBDF1-205, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-205ENST00000448893 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
RHBDF1-205ENST00000448893 ZFR2Q9UPR6 939 aaKnown RBP12.39□□□□□ -0.43
RHBDF1-205ENST00000448893 OR51B4Q9Y5P0 310 aa12.39□□□□□ -0.43
RHBDF1-205ENST00000448893 SPTY2D1-AS1A0A0U1RR47 76 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 PMS2P1A4D2B8 440 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 POM121BA6NF01 834 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 F5H5T6 163 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 RIOK3O14730 519 aaKnown RBP12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 TPP1O14773 563 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 CETN3O15182 167 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 BNIP3LO60238 219 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 TCEA3O75764 348 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 PCDH8O95206 1070 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 PAK4O96013 591 aaPredicted RBP12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 APOEP02649 317 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 CTSLP07711 333 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 CHRNA3P32297 505 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 FZD2Q14332 565 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 EDRF1Q3B7T1 1238 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 TMEM270Q6UE05 265 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 ZNF574Q6ZN55 896 aaPredicted RBP12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 Q6ZVU0 165 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 ATP6V0D2Q8N8Y2 350 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 OR52K2Q8NGK3 314 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 SLC25A13Q9UJS0 675 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 CFAP45Q9UL16 551 aa12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 ATXN7L1Q9ULK2 861 aaPredicted RBP12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
RHBDF1-205ENST00000448893 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 A6NNZ2 444 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 RNF103O00237 685 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 KPNA3O00505 521 aaPredicted RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 NOBOXO60393 691 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 TRUB2O95900 331 aaKnown RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 MT-CO1P00395 513 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 IGLV3-25P01717 112 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 EPB41P11171 864 aaKnown RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 SFTPCP11686 197 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 NME1P15531 152 aaKnown RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 CMA1P23946 247 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 TBXAS1P24557 533 aaPredicted RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 GPD2P43304 727 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 NFKB2Q00653 900 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 STILQ15468 1287 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 SEL1L3Q68CR1 1132 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 FBXL22Q6P050 247 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 USP53Q70EK8 1073 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 TAC4Q86UU9 113 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 CIR1Q86X95 450 aaPredicted RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 ZNF548Q8NEK5 533 aaPredicted RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 OR2A12Q8NGT7 310 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 FAM149B1Q96BN6 582 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 FEM1CQ96JP0 617 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 ARHGAP9Q9BRR9 750 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 SLC17A9Q9BYT1 436 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 GPR27Q9NS67 375 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 PCDHB4Q9Y5E5 795 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 KIF26BQ2KJY2 2108 aa12.37□□□□□ -0.43
RHBDF1-205ENST00000448893 CCDC187A0A096LP49 1063 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 M0QYV0 167 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 SART1O43290 800 aaKnown RBP12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 AQP9O43315 295 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 CALCAP01258 141 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 AFPP02771 609 aaKnown RBP12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 NTRK1P04629 796 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 ITGB2P05107 769 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 ITGA2BP08514 1039 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 BRD2P25440 801 aaKnown RBP12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 RPIAP49247 311 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 YWHAZP63104 245 aaKnown RBP12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 DPYDQ12882 1025 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 NR0B2Q15466 257 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 DEFB133Q30KQ1 61 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 TMEM259Q4ZIN3 620 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 ARSIQ5FYB1 569 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 RABGAP1LQ5R372 815 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 TTC39BQ5VTQ0 682 aaPredicted RBP12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 TCERG1LQ5VWI1 586 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 CRTC1Q6UUV9 634 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 ERN2Q76MJ5 926 aaKnown RBP12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 WDR48Q8TAF3 677 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 LMX1AQ8TE12 382 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 EXTL1Q92935 676 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 RNF34Q969K3 372 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 SGF29Q96ES7 293 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 IL12RB2Q99665 862 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 HDAC8Q9BY41 377 aa12.36□□□□□ -0.43
RHBDF1-205ENST00000448893 DYRK4Q9NR20 520 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms