RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 COL28A1Q2UY09 1125 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 PIP5KL1Q5T9C9 394 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 KLHDC7AQ5VTJ3 777 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 TRNP1Q6NT89 227 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 LINGO4Q6UY18 593 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 ERICH1Q86X53 443 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 PGAP3Q96FM1 320 aaPredicted RBP28.98■■■□□ 2.23
CBX4-202ENST00000448310 MYOCQ99972 504 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 C2orf49Q9BVC5 232 aaPredicted RBP28.98■■■□□ 2.23
CBX4-202ENST00000448310 ERVMER34-1Q9H9K5 563 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 DMTF1Q9Y222 760 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 TDRD6O60522 2096 aaKnown RBP28.98■■■□□ 2.23
CBX4-202ENST00000448310 MYLKQ15746 1914 aa28.98■■■□□ 2.23
CBX4-202ENST00000448310 DRGXA6NNA5 263 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 RNF103O00237 685 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 F9P00740 461 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 GLDCP23378 1020 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 STAT4Q14765 748 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 SLC25A52Q3SY17 297 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 NOP9Q86U38 636 aaKnown RBP28.97■■■□□ 2.23
CBX4-202ENST00000448310 CHST14Q8NCH0 376 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 OR2A12Q8NGT7 310 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 HNRNPLLQ8WVV9 542 aaKnown RBP28.97■■■□□ 2.23
CBX4-202ENST00000448310 KLK6Q92876 244 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 ARRDC3Q96B67 414 aa28.97■■■□□ 2.23
CBX4-202ENST00000448310 SAMSN1Q9NSI8 373 aaKnown RBP28.97■■■□□ 2.23
CBX4-202ENST00000448310 KPNA3O00505 521 aaPredicted RBP28.96■■■□□ 2.23
CBX4-202ENST00000448310 RNGTTO60942 597 aaKnown RBP28.96■■■□□ 2.23
CBX4-202ENST00000448310 CHRNA3P32297 505 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 RXRGP48443 463 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 SETMARQ53H47 684 aaPredicted RBP28.96■■■□□ 2.23
CBX4-202ENST00000448310 LRRC31Q6UY01 552 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 OXR1Q8N573 874 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 OR7D4Q8NG98 312 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 NAA15Q9BXJ9 866 aaKnown RBP28.96■■■□□ 2.23
CBX4-202ENST00000448310 PREBQ9HCU5 417 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 DKK4Q9UBT3 224 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 FARP1Q9Y4F1 1045 aaPredicted RBP28.96■■■□□ 2.23
CBX4-202ENST00000448310 PCDHGA1Q9Y5H4 931 aa28.96■■■□□ 2.23
CBX4-202ENST00000448310 E9PAM4 449 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 SRGAP2O75044 1071 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 SDC3O75056 442 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 RFPL3O75679 317 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 PRLRP16471 622 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 ERCC5P28715 1186 aaPredicted RBP28.95■■■□□ 2.22
CBX4-202ENST00000448310 NUDT1P36639 197 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 SCNN1AP37088 669 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 ACADVLP49748 655 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 ARTNQ5T4W7 220 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 SFMBT2Q5VUG0 894 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 KANSL1Q7Z3B3 1105 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 SETD3Q86TU7 594 aaPredicted RBP28.95■■■□□ 2.22
CBX4-202ENST00000448310 IQCHQ86VS3 1027 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 TMPRSS12Q86WS5 348 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 PDCD7Q8N8D1 485 aaKnown RBP28.95■■■□□ 2.22
CBX4-202ENST00000448310 DCAF4L2Q8NA75 395 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 CPA5Q8WXQ8 436 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 CFAP57Q96MR6 1250 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 TNKS2Q9H2K2 1166 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 CHMP5Q9NZZ3 219 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 PAXBP1Q9Y5B6 917 aa28.95■■■□□ 2.22
CBX4-202ENST00000448310 A0A1W2PQU0 124 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 PRAMEF26H0Y7S4 382 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 SLC31A1O15431 190 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 ENDOD1O94919 500 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 MMEP08473 750 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 UCHL3P15374 230 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 OR1E1P30953 314 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 GRIN3AQ8TCU5 1115 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 C1orf74Q96LT6 269 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 CCDC114Q96M63 670 aa28.94■■■□□ 2.22
CBX4-202ENST00000448310 TRPM6Q9BX84 2022 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 IGLV3-10A0A075B6K4 115 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 COL9A2Q14055 689 aaPredicted RBP28.93■■■□□ 2.22
CBX4-202ENST00000448310 C6orf118Q5T5N4 469 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 NAA35Q5VZE5 725 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 C22orf39Q6P5X5 142 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 FAM131BQ86XD5 332 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 TSC1Q92574 1164 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 SPON2Q9BUD6 331 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 FZD3Q9NPG1 666 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 DACH1Q9UI36 760 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 TMEM59LQ9UK28 342 aa28.93■■■□□ 2.22
CBX4-202ENST00000448310 F8VZ95 297 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 MAGEC1O60732 1142 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 JUPP14923 745 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 NOMO3P69849 1222 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 OVGP1Q12889 678 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 ARSIQ5FYB1 569 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 PDZD3Q86UT5 571 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 EMC1Q8N766 993 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 TMIEQ8NEW7 156 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 EPS8L1Q8TE68 723 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 KLHDC7BQ96G42 594 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 NUP62CLQ9H1M0 184 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 TAB2Q9NYJ8 693 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 ZNF212Q9UDV6 495 aa28.92■■■□□ 2.22
CBX4-202ENST00000448310 BAHCC1Q9P281 2608 aa28.91■■■□□ 2.22
CBX4-202ENST00000448310 LSM8O95777 96 aaKnown RBP28.91■■■□□ 2.22
CBX4-202ENST00000448310 CLCN6P51797 869 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms