RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	PEBP4	Q96S96	227 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	PAFAH2	Q99487	392 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	PAIP2	Q9BPZ3	127 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	DHRS4	Q9BTZ2	278 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	TUBB6	Q9BUF5	446 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	IQCG	Q9H095	443 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	AP5M1	Q9H0R1	490 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	R3HDML	Q9H3Y0	253 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF408	Q9H9D4	720 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	RXFP1	Q9HBX9	757 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	PCDH18	Q9HCL0	1135 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	XAB2	Q9HCS7	855 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC40A1	Q9NP59	571 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	PNPLA8	Q9NP80	782 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	NGRN	Q9NPE2	291 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	KLC4	Q9NSK0	619 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC38A7	Q9NVC3	462 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	SNTG2	Q9NY99	539 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	RRN3	Q9NYV6	651 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	CTNNAL1	Q9UBT7	734 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	STAP1	Q9ULZ2	295 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC12A4	Q9UP95	1085 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	TLR6	Q9Y2C9	796 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF281	Q9Y2X9	895 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	RAD54B	Q9Y620	910 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	USH1C	Q9Y6N9	552 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF236	Q9UL36	1845 aa		4.18	□□□□□ -1.74
PTPN12-208	ENST00000447995	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.18	□□□□□ -1.74	5e-6	■■■■■ 39
PTPN12-208	ENST00000447995	PLXNB2	O15031	1838 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SCN4A	P35499	1836 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	POLR2A	P24928	1970 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SMIM28	A0A1B0GU29	152 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ARHGEF37	A1IGU5	675 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	C17orf102	A2RUQ5	167 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	KPNA7	A9QM74	516 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	UPK3BL1	B0FP48	263 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	UPK3BL2	E5RIL1	263 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	GOLGA8M	H3BSY2	632 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	DNM1L	O00429	736 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PIR	O00625	290 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PPP1R12A	O14974	1030 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	XPO1	O14980	1071 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	KCNN4	O15554	427 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PAPSS1	O43252	624 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TYROBP	O43914	113 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PSPN	O60542	156 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	EDF1	O60869	148 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	GPR32	O75388	356 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SPAG7	O75391	227 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CSDE1	O75534	798 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	DAB1	O75553	588 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	GCAT	O75600	419 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	GRAP2	O75791	330 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	FAM155B	O75949	473 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	KRT38	O76015	456 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TMEM63A	O94886	807 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	UBOX5	O94941	541 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	FBXO21	O94952	628 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	IL1B	P01584	269 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SNRPA	P09012	282 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CD48	P09326	243 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	NEFH	P12036	1026 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	MLN	P12872	115 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	NQO1	P15559	274 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CREB1	P16220	341 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SYN1	P17600	705 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PI3	P19957	117 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	WARS	P23381	471 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PAX3	P23760	479 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CYP2F1	P24903	491 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	GCA	P28676	217 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	LRPAP1	P30533	357 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	HOXA11	P31270	313 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ELK3	P41970	407 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	MATK	P42679	507 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	RPL34	P49207	117 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	MNAT1	P51948	309 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	YWHAZ	P63104	245 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	BNIP1	Q12981	228 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	DNAJC3	Q13217	504 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	RIPK1	Q13546	671 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	MPP2	Q14168	576 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	FASTKD3	Q14CZ7	662 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SNX17	Q15036	470 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PDK1	Q15118	436 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TAF1C	Q15572	869 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	CDO1	Q16878	200 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SOWAHA	Q2M3V2	549 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF385B	Q569K4	471 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC45A4	Q5BKX6	768 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	FAM133B	Q5BKY9	247 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	XKR4	Q5GH76	650 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TMEM201	Q5SNT2	666 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	FNBP1L	Q5T0N5	605 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	TMEM63B	Q5T3F8	832 aa		4.17	□□□□□ -1.74
PTPN12-208	ENST00000447995	ANKRD22	Q5VYY1	191 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms