RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 H0Y3Z8 333 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 SLC28A1O00337 649 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ATG13O75143 517 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 STX11O75558 287 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 RECQL5O94762 991 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 EPN2O95208 641 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 APLP1P51693 650 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ERVK-21P61565 698 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 EPS8Q12929 822 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TPGS2Q68CL5 300 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CNBD2Q96M20 576 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 EPB41L4BQ9H329 900 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CORO1CQ9ULV4 474 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 BTNL10A8MVZ5 291 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 LDOC1O95751 146 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 NFICP08651 508 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PTPN2P17706 415 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PAICSP22234 425 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TALDO1P37837 337 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 NUDT2P50583 147 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 HYIQ5T013 277 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 LUZP2Q86TE4 346 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ARID3BQ8IVW6 561 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ZNF473Q8WTR7 871 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 THAP11Q96EK4 314 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 EFR3BQ9Y2G0 817 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TRIM13O60858 407 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 IL1BP01584 269 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 KCNJ1P48048 391 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 RPIAP49247 311 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ACSM2AQ08AH3 577 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 KPNB1Q14974 876 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 BMT2Q1RMZ1 405 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ACSM2BQ68CK6 577 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 GPR135Q8IZ08 494 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 SCAIQ8N9R8 606 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ZSCAN18Q8TBC5 510 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PPP1R14AQ96A00 147 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 POP1Q99575 1024 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CAB39Q9Y376 341 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TLR5O60602 858 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CD52P31358 61 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ZNF280AP59817 542 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 GRSF1Q12849 480 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ITGADQ13349 1161 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CSHL1Q14406 222 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CCDC85BQ15834 202 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CBWD6Q4V339 395 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 RAD9BQ6WBX8 426 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ADGRA1Q86SQ6 560 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PHF13Q86YI8 300 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 SVOPQ8N4V2 548 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 POMGNT2Q8NAT1 580 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 METTL6Q8TCB7 284 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TRPM4Q8TD43 1214 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 MYLPFQ96A32 169 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PPP1R36Q96LQ0 422 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 INPP4AQ96PE3 977 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 NIFKQ9BYG3 293 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CDT1Q9H211 546 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TIMM13Q9Y5L4 95 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ABHD14A-ACY1A0A1B0GW23 586 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ACAT1P24752 427 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 NOS3P29474 1203 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 MIPP30301 263 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 POLE2P56282 527 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 GUCY1A3Q02108 690 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 KCNT1Q5JUK3 1230 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CHPFQ8IZ52 775 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 REXO5Q96IC2 774 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PPP3R2Q96LZ3 170 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TMEM121Q9BTD3 319 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ASB8Q9H765 288 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PER2O15055 1255 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 GSTM1P09488 218 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 OGNP20774 298 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ALDH9A1P49189 494 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 DMTNQ08495 405 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 SEC16BQ96JE7 1060 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 FAM111AQ96PZ2 611 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ACOX2Q99424 681 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 PCBD2Q9H0N5 130 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 POLR1BQ9H9Y6 1135 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 FANCFQ9NPI8 374 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ATP6V1HQ9UI12 483 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 KCNE2Q9Y6J6 123 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 E9PBE3 544 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ELFN1P0C7U0 828 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ITGA2P17301 1181 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ITGA1P56199 1179 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 FRG1Q14331 258 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 KCNT2Q6UVM3 1135 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 CERS6Q6ZMG9 384 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 TTC7BQ86TV6 843 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 LONP2Q86WA8 852 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 SMG7Q92540 1137 aaKnown RBP8.66□□□□□ -1.02
PTPN3-204ENST00000446349 ELMO1Q92556 727 aa8.66□□□□□ -1.02
PTPN3-204ENST00000446349 APOL4Q9BPW4 351 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms