RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 UNC5BQ8IZJ1 945 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 NSMCE1Q8WV22 266 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 PTCD2Q8WV60 388 aaKnown RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 CCT6BQ92526 530 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 IGSF8Q969P0 613 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 AZIN2Q96A70 460 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 HMCESQ96FZ2 354 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 TRMT2BQ96GJ1 504 aaKnown RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 RPRD1AQ96P16 312 aaPredicted RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 FCRL3Q96P31 734 aaPredicted RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 KIFC1Q9BW19 673 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 SLC25A51Q9H1U9 297 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 C11orf49Q9H6J7 331 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 ACTR5Q9H9F9 607 aaPredicted RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 ZNF212Q9UDV6 495 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 PRKAG3Q9UGI9 489 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 PHTF1Q9UMS5 762 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 PLLPQ9Y342 182 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 BRCA2P51587 3418 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 MIA3Q5JRA6 1907 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 ZCWPW2A0A1B0GU75 182 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 F5H5T6 163 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 SEC24AO95486 1093 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 PEX11BO96011 259 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 TIMP1P01033 207 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 CRHR1P34998 444 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 ADRA1AP35348 466 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 GJA8P48165 433 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 PPP3CCP48454 512 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 HECTD3Q5T447 861 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 STXBP5Q5T5C0 1151 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 MROH9Q5TGP6 573 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 TRIM42Q8IWZ5 723 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 GPR65Q8IYL9 337 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 PLD4Q96BZ4 506 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 ZNF512Q96ME7 567 aaPredicted RBP19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 FAM111AQ96PZ2 611 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 SP110Q9HB58 689 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 MRM3Q9HC36 420 aaKnown RBP19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 SPG21Q9NZD8 308 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 UBP1Q9NZI7 540 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 TRPM5Q9NZQ8 1165 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 MAFFQ9ULX9 164 aa19.2■□□□□ 0.66
SEMA3D-202ENST00000444867 CHD5Q8TDI0 1954 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 ZNF840PA6NDX5 716 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 C2CD2LO14523 706 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 ATP9BO43861 1147 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 ACSL4O60488 711 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 RAMP2O60895 175 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 HMGA1P17096 107 aaKnown RBP19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 ALDH1A3P47895 512 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 IL10RBQ08334 325 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 RAB33AQ14088 237 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 PCID2Q5JVF3 399 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 CGB2Q6NT52 195 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 POTEHQ6S545 545 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 FAM47EQ6ZV65 393 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 DDX53Q86TM3 631 aaKnown RBP19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 TEX26Q8N6G2 289 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 SPATA22Q8NHS9 363 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 ARMC5Q96C12 935 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 ZNF419Q96HQ0 510 aaPredicted RBP19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 APOL2Q9BQE5 337 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 NSMCE4AQ9NXX6 385 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 KIAA1671Q9BY89 1806 aa19.19■□□□□ 0.66
SEMA3D-202ENST00000444867 URODP06132 367 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 ERVK-10P10266 1014 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 SLC11A2P49281 568 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 HARS2P49590 506 aaKnown RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 BTG3Q14201 252 aaPredicted RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 VEPH1Q14D04 833 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 POLD3Q15054 466 aaPredicted RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 DBN1Q16643 649 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 MARC1Q5VT66 337 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 RNF43Q68DV7 783 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 NADSYN1Q6IA69 706 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 CES3Q6UWW8 571 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 TRPM8Q7Z2W7 1104 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 IPMKQ8NFU5 416 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 FICDQ9BVA6 458 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 NACA2Q9H009 215 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 MANSC1Q9H8J5 431 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 VPS45Q9NRW7 570 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 KLHL14Q9P2G3 628 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 STK39Q9UEW8 545 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 YIPF1Q9Y548 306 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 ANAPC1Q9H1A4 1944 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 KIAA0355O15063 1070 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 MT-CYBP00156 380 aaPredicted RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 IL1BP01584 269 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 ITGA2BP08514 1039 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 SPRP35270 261 aaPredicted RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 SERPINB4P48594 390 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 CSE1LP55060 971 aaKnown RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 WDR5P61964 334 aaKnown RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 PDPK2PQ6A1A2 396 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 PKN3Q6P5Z2 889 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 NDUFAF2Q8N183 169 aa19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 PPHLN1Q8NEY8 458 aaKnown RBP19.18■□□□□ 0.66
SEMA3D-202ENST00000444867 IMP4Q96G21 291 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms