RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
HCFC1-203ENST00000444191 PSMD13Q9UNM6 376 aa11.84□□□□□ -0.51
HCFC1-203ENST00000444191 NUP205Q92621 2012 aa11.83□□□□□ -0.51
HCFC1-203ENST00000444191 BTAF1O14981 1849 aa11.83□□□□□ -0.51
HCFC1-203ENST00000444191 TTC36A6NLP5 189 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 CAPN14A8MX76 684 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ATP6V1G1O75348 118 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 TNFAIP8O95379 198 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 PIGRP01833 764 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 PIRTP0C851 137 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 HSPA8P11142 646 aaKnown RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 NR2C2P49116 596 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 FASTKQ14296 549 aaKnown RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ACBD5Q5T8D3 534 aaPredicted RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 WSCD1Q658N2 575 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 NCBP2-AS2Q69YL0 99 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 CLEC6AQ6EIG7 209 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 C16orf87Q6PH81 154 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 OLFML1Q6UWY5 402 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 HFE2Q6ZVN8 426 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ACVR1CQ8NER5 493 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 LRTOMTQ8WZ04 291 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 FCRL3Q96P31 734 aaPredicted RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 NAT9Q9BTE0 207 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 CNTN6Q9UQ52 1028 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 HEMK1Q9Y5R4 338 aaPredicted RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 UBDO15205 165 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 RPL10P27635 214 aaKnown RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 RXRBP28702 533 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 MAXP61244 160 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 FAM219BQ5XKK7 198 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ARHGAP17Q68EM7 881 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 AAGABQ6PD74 315 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 B3GNT6Q6ZMB0 384 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 PSTKQ8IV42 348 aaKnown RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 DCBLD1Q8N8Z6 715 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ZFP42Q96MM3 310 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 PKP2Q99959 881 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 TKTL2Q9H0I9 626 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ING2Q9H160 280 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 GPAMQ9HCL2 828 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 UTP6Q9NYH9 597 aaKnown RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 CNTN3Q9P232 1028 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 KIAA1257Q9ULG3 409 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 COMMD3-BMI1R4GMX3 469 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 COL16A1Q07092 1604 aaPredicted RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 HMX2A2RU54 273 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 GMNNO75496 209 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 TGFB3P10600 412 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 AOC1P19801 751 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 PTPN7P35236 360 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ADARP55265 1226 aaKnown RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 UTS2BQ765I0 119 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 NT5DC4Q86YG4 428 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 APOBEC3FQ8IUX4 373 aaKnown RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
HCFC1-203ENST00000444191 OR9I1Q8NGQ6 314 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 DNAJB3Q8WWF6 145 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 ZDHHC2Q9UIJ5 367 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 AP4S1Q9Y587 144 aa11.83□□□□□ -0.52
HCFC1-203ENST00000444191 FAM95CA0A1B0GW59 222 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 TCRBV5S1A1TA0A578 114 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 CASTOR2A6NHX0 329 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 KLF11O14901 512 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 ANGPT2O15123 496 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 GCATO75600 419 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 PSME3P61289 254 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 PRKAA1Q13131 559 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 LAMC2Q13753 1193 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 HSF5Q4G112 596 aaPredicted RBP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 TEX44Q53QW1 395 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 NOMO2Q5JPE7 1267 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 UBR7Q8N806 425 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 TSPAN14Q8NG11 270 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 OR6J1Q8NGC5 347 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 TUBGCP3Q96CW5 907 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 DGCR14Q96DF8 476 aaKnown RBP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 HAUS8Q9BT25 410 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 CCDC68Q9H2F9 335 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 DNAAF2Q9NVR5 837 aaKnown RBP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 NCKIPSDQ9NZQ3 722 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 OR12D3Q9UGF7 316 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 DOLKQ9UPQ8 538 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 ERI2A8K979 691 aaKnown RBP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 MRASO14807 208 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 XPOTO43592 962 aaKnown RBP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 BAIAP3O94812 1187 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 PARNO95453 639 aaKnown RBP11.82□□□□□ -0.52
HCFC1-203ENST00000444191 CLIC3O95833 236 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 MYL3P08590 195 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 CRABP2P29373 138 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 CHRNA4P43681 627 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 TAF6P49848 677 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 OAZ1P54368 228 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 PRAMEF19Q5SWL8 479 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 IL23RQ5VWK5 629 aa11.82□□□□□ -0.52
HCFC1-203ENST00000444191 LRRC8BQ6P9F7 803 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms