RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 TRIM69Q86WT6 500 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 PHF13Q86YI8 300 aaPredicted RBP16.97■□□□□ 0.31
IRF3-204ENST00000442265 EMC1Q8N766 993 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 ATP11CQ8NB49 1132 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 TMIEQ8NEW7 156 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 NEK11Q8NG66 645 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 SLC30A5Q8TAD4 765 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 PIP4K2CQ8TBX8 421 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 SETD7Q8WTS6 366 aaKnown RBP16.97■□□□□ 0.31
IRF3-204ENST00000442265 RXFP2Q8WXD0 754 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 OSBPL2Q9H1P3 480 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 KLK13Q9UKR3 277 aa16.97■□□□□ 0.31
IRF3-204ENST00000442265 APOBEC2Q9Y235 224 aaKnown RBP16.97■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3DA0A087WVF3 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3IA0A087WXS9 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3EA0A087X179 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3KA0A087X1G2 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 A0A1B0GTQ1 180 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3FA6NER0 549 aaPredicted RBP16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3LB9A6J9 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 SRGAP2O75044 1071 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 RTN2O75298 545 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 KRT37O76014 449 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3HP0C7X1 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 SDC4P31431 198 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 GRK6P43250 576 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 C21orf59P57076 290 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 UBXN1Q04323 297 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 CNTN1Q12860 1018 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 CLEC16AQ2KHT3 1053 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3GQ6DHY5 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3CQ6IPX1 549 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 NEK5Q6P3R8 708 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TFAP2DQ7Z6R9 452 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 SLCO6A1Q86UG4 719 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TBC1D3Q8IZP1 549 aaPredicted RBP16.96■□□□□ 0.31
IRF3-204ENST00000442265 CHCHD4Q8N4Q1 142 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 JOSD2Q8TAC2 188 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 RHBDD1Q8TEB9 315 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 CCDC114Q96M63 670 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 ERVMER34-1Q9H9K5 563 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 PREBQ9HCU5 417 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 TOR4AQ9NXH8 423 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 OR12D3Q9UGF7 316 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 DMTF1Q9Y222 760 aa16.96■□□□□ 0.31
IRF3-204ENST00000442265 FARP1Q9Y4F1 1045 aaPredicted RBP16.96■□□□□ 0.31
IRF3-204ENST00000442265 NYNRINQ9P2P1 1898 aaKnown RBP16.95■□□□□ 0.3
IRF3-204ENST00000442265 K7ERQ8 282 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 WNT9AO14904 365 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 SMAD6O43541 496 aaKnown RBP16.95■□□□□ 0.3
IRF3-204ENST00000442265 ZNF821O75541 412 aaPredicted RBP16.95■□□□□ 0.3
IRF3-204ENST00000442265 CTSLP07711 333 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 KRT3P12035 628 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 CHRNA3P32297 505 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 NSFP46459 744 aaKnown RBP16.95■□□□□ 0.3
IRF3-204ENST00000442265 TAS2R38P59533 333 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 PPP2CBP62714 309 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 PPP2CAP67775 309 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 ATP11AP98196 1134 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 OVGP1Q12889 678 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 ARL13BQ3SXY8 428 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 RAB6CQ53S08 254 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 PIP5KL1Q5T9C9 394 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 NAPEPLDQ6IQ20 393 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 RETSATQ6NUM9 610 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 IQCHQ86VS3 1027 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 MFSD2AQ8NA29 543 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 C3orf20Q8ND61 904 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 NTAN1Q96AB6 310 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 SERAC1Q96JX3 654 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 ELF4Q99607 663 aaPredicted RBP16.95■□□□□ 0.3
IRF3-204ENST00000442265 BPIFA3Q9BQP9 254 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 C11orf70Q9BRQ4 267 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 CEP44Q9C0F1 390 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 RAB6CQ9H0N0 254 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 ADAM22Q9P0K1 906 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 NEU3Q9UQ49 428 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 BTBD3Q9Y2F9 522 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 ZFYVE26Q68DK2 2539 aa16.95■□□□□ 0.3
IRF3-204ENST00000442265 TCRBV5S1A1TA0A578 114 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 FAM170AA1A519 330 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 SIGLEC16A6NMB1 481 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 TLR4O00206 839 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 KCNK3O14649 394 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 CALB1P05937 261 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 RHOQP17081 205 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 CDK11BP21127 795 aaKnown RBP16.94■□□□□ 0.3
IRF3-204ENST00000442265 RRM1P23921 792 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 RFC1P35251 1148 aaPredicted RBP16.94■□□□□ 0.3
IRF3-204ENST00000442265 HDAC4P56524 1084 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 NXPH1P58417 271 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 GNA12Q03113 381 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 C1QBPQ07021 282 aaKnown RBP16.94■□□□□ 0.3
IRF3-204ENST00000442265 CCDC15Q0P6D6 951 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 SCAPQ12770 1279 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 C15orf59Q2T9L4 293 aaPredicted RBP16.94■□□□□ 0.3
IRF3-204ENST00000442265 C22orf39Q6P5X5 142 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 MON1BQ7L1V2 547 aa16.94■□□□□ 0.3
IRF3-204ENST00000442265 PRPF39Q86UA1 669 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms