RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ATP6V0D2Q8N8Y2 350 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM71DQ8N9W8 422 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FBXO25Q8TCJ0 367 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SHROOM3Q8TF72 1996 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TFB1MQ8WVM0 346 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CASP10Q92851 521 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 AZIN2Q96A70 460 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TBC1D31Q96DN5 1066 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 MRRFQ96E11 262 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC39A13Q96H72 371 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 BTN2A3PQ96KV6 586 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF512Q96ME7 567 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 GDAP1L1Q96MZ0 367 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TTC25Q96NG3 672 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SAMD11Q96NU1 681 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PPP1R2P1Q96PQ5 205 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 QKIQ96PU8 341 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 VAT1Q99536 393 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM118BQ9BPY3 351 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 DDX50Q9BQ39 737 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CCDC77Q9BR77 488 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TMEM121Q9BTD3 319 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 EMILIN2Q9BXX0 1053 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TXLNGYQ9BZA5 131 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 NACA2Q9H009 215 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 KLC2Q9H0B6 622 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 STMN4Q9H169 189 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PLEKHA4Q9H4M7 779 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 NMUR1Q9HB89 426 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CYP4F11Q9HBI6 524 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 USP29Q9HBJ7 922 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRPM5Q9NZQ8 1165 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 GMIPQ9P107 970 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CALCOCO1Q9P1Z2 691 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SAE1Q9UBE0 346 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM153AQ9UHL3 310 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 DPP7Q9UHL4 492 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRHDEQ9UKU6 1024 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SOX13Q9UN79 622 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 NR2E3Q9Y5X4 410 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 IRAK3Q9Y616 596 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ANAPC1Q9H1A4 1944 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC12A8A0AV02 714 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF840PA6NDX5 716 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 A6NNZ2 444 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 ERI2A8K979 691 aaKnown RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 WASH4PA8MWX3 477 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM72CH0Y354 149 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 AP3B1O00203 1094 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 GIPC1O14908 333 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 DCLK1O15075 740 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 ALOX15BO15296 676 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 CHADO15335 359 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TEX28O15482 410 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 KCNN4O15554 427 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 PSMD3O43242 534 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TLR5O60602 858 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 OPHN1O60890 802 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 SOAT2O75908 522 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 SEC24AO95486 1093 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TTC4O95801 387 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 IGLV3-27P01718 113 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 IVLP07476 585 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 NUDT17P0C025 328 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 MYZAPP0CAP1 466 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 SRGAP2BP0DMP2 458 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TSHRP16473 764 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 PFKLP17858 780 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 ERCC2P18074 760 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 RPL17P18621 184 aaKnown RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 ATF6P18850 670 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TPSB2P20231 275 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 EPHB2P29323 1055 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 HOXC13P31276 330 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 CTNNB1P35222 781 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 FDFT1P37268 417 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAGEA4P43358 317 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAGEA6P43360 314 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC11A2P49281 568 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 HARS2P49590 506 aaKnown RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 GPR15P49685 360 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 VPS41P49754 854 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 NDST2P52849 883 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 ARL4CP56559 192 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM193AP78312 1265 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 CDK16Q00536 496 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 GBE1Q04446 702 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 PPIDQ08752 370 aaKnown RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 IFFO1Q0D2I5 559 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 GALNT2Q10471 571 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC10A2Q12908 348 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 PRKD1Q15139 912 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRIP13Q15645 432 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TPSAB1Q15661 275 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TSNAXIP1Q2TAA8 658 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 TUBB8Q3ZCM7 444 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 RNASEH2BQ5TBB1 312 aaKnown RBP4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM72AQ5TYM5 149 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 RASIP1Q5U651 963 aa4.07□□□□□ -1.76
HMGB1P37-201ENST00000439613 SDHAF4Q5VUM1 108 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms