RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GSTT2P0CG29 244 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 GSTT2BP0CG30 244 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CDH5P33151 784 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 RPL14P50914 215 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CDK18Q07002 472 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CERCAMQ5T4B2 595 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 IFNEQ86WN2 208 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 WDR49Q8IV35 697 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CERS2Q96G23 380 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 COG8Q96MW5 612 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 PIF1Q9H611 641 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CLK4Q9HAZ1 481 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 IARS2Q9NSE4 1012 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 DTLQ9NZJ0 730 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 SIX4Q9UIU6 781 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 PRPF19Q9UMS4 504 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 TMEM247A6NEH6 219 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 RNF103O00237 685 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 LDHAP00338 332 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CCDC130P13994 396 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 ALDH1B1P30837 517 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 SDC4P31431 198 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 RCVRNP35243 200 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 ESRRGP62508 458 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 NR1D2Q14995 579 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 AGKQ53H12 422 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 ZFP1Q6P2D0 407 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 KDELC2Q7Z4H8 507 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 SLC15A4Q8N697 577 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CATSPER1Q8NEC5 780 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 RP9Q8TA86 221 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 OSBPL11Q9BXB4 747 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 ACE2Q9BYF1 805 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 STN1Q9H668 368 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 DUS2Q9NX74 493 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 VPS51Q9UID3 782 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CDYLQ9Y232 598 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 ST14Q9Y5Y6 855 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 STYXL1Q9Y6J8 313 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 RNF103-CHMP3A0A140T963 221 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 KANSL1LA0AUZ9 987 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TMED10P49755 219 aaKnown RBP13.6□□□□□ -0.23
ACTN1-204ENST00000438964 BMXP51813 675 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 PRPSAP1Q14558 356 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 KIZQ2M2Z5 673 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TMEM214Q6NUQ4 689 aaKnown RBP13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TIFABQ6ZNK6 161 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 LYSMD3Q7Z3D4 306 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF280CQ8ND82 737 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 DDHD1Q8NEL9 900 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 FNIP1Q8TF40 1166 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 SGCDQ92629 289 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 MCRS1Q96EZ8 462 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 MTG1Q9BT17 334 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-204ENST00000438964 EPS8L2Q9H6S3 715 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 SPON1Q9HCB6 807 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 PTPRHQ9HD43 1115 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TNFRSF12AQ9NP84 129 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF302Q9NR11 478 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 PNPLA3Q9NST1 481 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 BCLAF3A2AJT9 711 aaKnown RBP13.6□□□□□ -0.23
ACTN1-204ENST00000438964 YDJCA8MPS7 323 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 ENDOD1O94919 500 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TNNC2P02585 160 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 MYL4P12829 197 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 NFKBIAP25963 317 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 NDST1P52848 882 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 GALNT18Q6P9A2 607 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 NIPA1Q7RTP0 329 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 VSIG10LQ86VR7 867 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 URGCPQ8TCY9 931 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 HTR3CQ8WXA8 447 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TANKQ92844 425 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TMEM176AQ96HP8 235 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 NEURL2Q9BR09 285 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 BRD8Q9H0E9 1235 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 RPF2Q9H7B2 306 aaKnown RBP13.6□□□□□ -0.23
ACTN1-204ENST00000438964 FBRSL1Q9HCM7 1045 aaKnown RBP13.6□□□□□ -0.23
ACTN1-204ENST00000438964 CHRAC1Q9NRG0 131 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 PCDHGA7Q9Y5G6 932 aa13.6□□□□□ -0.23
ACTN1-204ENST00000438964 TOR1BO14657 336 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 MED7O43513 233 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 MFSD11O43934 449 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 LCP1P13796 627 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 EEF1B2P24534 225 aaKnown RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 GP5P40197 560 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 BCAP31P51572 246 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 RABGGTBP53611 331 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 NUP107P57740 925 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 MCCD1P59942 119 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 PITX1P78337 314 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 PRKCQQ04759 706 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 RAB39AQ14964 217 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 XKR3Q5GH77 459 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 SNRNP48Q6IEG0 339 aaKnown RBP13.59□□□□□ -0.23
ACTN1-204ENST00000438964 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 PID1Q7Z2X4 250 aa13.59□□□□□ -0.23
ACTN1-204ENST00000438964 ACOT1Q86TX2 421 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms