RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 DECR2Q9NUI1 292 aa4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 TRNAU1APQ9NX07 287 aaKnown RBP4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 GGA3Q9NZ52 723 aa4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 IFT80Q9P2H3 777 aaPredicted RBP4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 UPB1Q9UBR1 384 aa4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 CNPY2Q9Y2B0 182 aa4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 CLDN16Q9Y5I7 305 aa4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 HS3ST3B1Q9Y662 390 aa4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 MST1RQ04912 1400 aa4.09□□□□□ -1.75
LSM1P1-201ENST00000438629 GAGE12JA6NER3 117 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 GAGE10A6NGK3 116 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 FAM90A7PA6NKC0 464 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 FAM90A22PA8MWA6 464 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 FAM90A12PA8MX19 464 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 FAM90A23PA8MXZ1 464 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 TSPAN4O14817 238 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 RNMTO43148 476 aaKnown RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 TMCC1O94876 653 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 AGR2O95994 175 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 IL1AP01583 271 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 YWHAQP27348 245 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ARL1P40616 181 aaPredicted RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ALDH7A1P49419 539 aaKnown RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 MTX1Q13505 466 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 TWIST1Q15672 202 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 GPR68Q15743 365 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 SMTNL2Q2TAL5 461 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 Q4G0T1 1027 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 SH2D4BQ5SQS7 431 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 MANEAQ5SRI9 462 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 SHC4Q6S5L8 630 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 B4GALNT4Q76KP1 1039 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 TMC8Q8IU68 726 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 CAMK1DQ8IU85 385 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 GHDCQ8N2G8 530 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 SLC25A41Q8N5S1 370 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ARFGAP1Q8N6T3 406 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 LSM14AQ8ND56 463 aaKnown RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 SETD9Q8NE22 299 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 HSPH1Q92598 858 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 HTRA1Q92743 480 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 SEC62Q99442 399 aaKnown RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ZNF304Q9HCX3 659 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 SPAG4Q9NPE6 437 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 FZD3Q9NPG1 666 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 PNRC2Q9NPJ4 139 aaKnown RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ENTPD7Q9NQZ7 604 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 TLR8Q9NR97 1041 aaKnown RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ZDHHC7Q9NXF8 308 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 GRHL1Q9NZI5 618 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 HCN3Q9P1Z3 774 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ICKQ9UPZ9 632 aa4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.08□□□□□ -1.76
LSM1P1-201ENST00000438629 WDR91A4D1P6 747 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 EYA2O00167 538 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 CBX6O95503 412 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 DDAH2O95865 285 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 SERPINC1P01008 464 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 PAX3P23760 479 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 TBXAS1P24557 533 aaPredicted RBP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 ELF1P32519 619 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 PAFAH1B1P43034 410 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 CLCNKBP51801 687 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 CDH15P55291 814 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 RPP30P78346 268 aaKnown RBP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 GAD2Q05329 585 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 SRSF1Q07955 248 aaKnown RBP eCLIP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 RBMS2Q15434 407 aaKnown RBP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 SLC18A3Q16572 532 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 IL20RBQ6UXL0 311 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 TRAPPC11Q7Z392 1133 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 WDR5BQ86VZ2 330 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 DNAAF1Q8NEP3 725 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 ZMIZ2Q8NF64 920 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 RAB40AQ8WXH6 277 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 EIF2AK1Q9BQI3 630 aaKnown RBP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 FUZQ9BT04 418 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 FRMD8Q9BZ67 464 aaPredicted RBP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 SLC29A3Q9BZD2 475 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 INTS2Q9H0H0 1204 aaKnown RBP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 MROH8Q9H579 483 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 AAMDCQ9H7C9 122 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 UBN1Q9NPG3 1134 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 BEX4Q9NWD9 120 aaPredicted RBP4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 HSF4Q9ULV5 492 aa4.07□□□□□ -1.76
LSM1P1-201ENST00000438629 TRBV5-7A0A0A0MS05 114 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 C17orf113A0A1B0GUU1 675 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 DNAJC9-AS1A6NH13 148 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 A6NLC8 198 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 ZNF814B7Z6K7 855 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 TEX22C9J3V5 150 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 ADAM10O14672 748 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 PPEF2O14830 753 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 TOP3BO95985 862 aaKnown RBP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 KLKB1P03952 638 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 HNRNPA1P09651 372 aaKnown RBP eCLIP4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 MYZAPP0CAP1 466 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 GPR12P47775 334 aa4.06□□□□□ -1.76
LSM1P1-201ENST00000438629 KCNJ4P48050 445 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms