RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DDX19AQ9NUU7 478 aaKnown RBP11.46□□□□□ -0.57
RTN4-211ENST00000438462 SIX4Q9UIU6 781 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 ITGA11Q9UKX5 1188 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 SARDHQ9UL12 918 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 PNMA8BQ9ULN7 279 aaPredicted RBP11.46□□□□□ -0.57
RTN4-211ENST00000438462 DOLKQ9UPQ8 538 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 KIAA1024Q9UPX6 916 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 A0A1W2PQH9 124 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 TISP43B9A030 160 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 INPP4BO15327 924 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 ASLP04424 464 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 MUTP22033 750 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 NFKBIAP25963 317 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 CCT6AP40227 531 aaKnown RBP11.45□□□□□ -0.58
RTN4-211ENST00000438462 STAT5AP42229 794 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 RABIFP47224 123 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 SGSHP51688 502 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 CHAF1BQ13112 559 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 TCEA2Q15560 299 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 PHC2Q8IXK0 858 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 B3GALNT2Q8NCR0 500 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 OR6C4Q8NGE1 309 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 CHTF18Q8WVB6 975 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 TTC17Q96AE7 1141 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 CCDC74BQ96LY2 380 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 SPRY4Q9C004 299 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 SNX25Q9H3E2 840 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 FBXO44Q9H4M3 255 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 APPL1Q9UKG1 709 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 ZFR2Q9UPR6 939 aaKnown RBP11.45□□□□□ -0.58
RTN4-211ENST00000438462 ZNF451Q9Y4E5 1061 aa11.45□□□□□ -0.58
RTN4-211ENST00000438462 ATP8B3O60423 1300 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 E9PMD0 336 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 ABCB7O75027 752 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 IL18RAPO95256 599 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 MAP3K6O95382 1288 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 GNL1P36915 607 aaPredicted RBP11.44□□□□□ -0.58
RTN4-211ENST00000438462 CTSOP43234 321 aaPredicted RBP11.44□□□□□ -0.58
RTN4-211ENST00000438462 NCKAP1LP55160 1127 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 RBP5P82980 135 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 COG7P83436 770 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 SEL1L3Q68CR1 1132 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 ADALQ6DHV7 355 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 CRELD2Q6UXH1 353 aaPredicted RBP11.44□□□□□ -0.58
RTN4-211ENST00000438462 Q6ZUG5 572 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 C1orf186Q6ZWK4 172 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 SFR1Q86XK3 245 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 FAM129CQ86XR2 697 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 KDM1BQ8NB78 822 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 UBE2Q2Q8WVN8 375 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 RTP4Q96DX8 246 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 TBATAQ96M53 351 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 MED10Q9BTT4 135 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 KRT82Q9NSB4 513 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 ERVW-1Q9UQF0 538 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 HS3ST3A1Q9Y663 406 aa11.44□□□□□ -0.58
RTN4-211ENST00000438462 H0YCG3 227 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 RAD51BO15315 384 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 CPA1P15085 419 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 HNRNPH3P31942 346 aaKnown RBP11.43□□□□□ -0.58
RTN4-211ENST00000438462 DLSTP36957 453 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 RAB15P59190 212 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 EFEMP1Q12805 493 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 NR5A1Q13285 461 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 HDAC1Q13547 482 aaPredicted RBP11.43□□□□□ -0.58
RTN4-211ENST00000438462 CHRNA6Q15825 494 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 KMT5BQ4FZB7 885 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 GPRIN1Q7Z2K8 1008 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 PIM3Q86V86 326 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 ZMIZ2Q8NF64 920 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 SMARCD1Q96GM5 515 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 SPAG5Q96R06 1193 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 FOXC2Q99958 501 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 NUDT22Q9BRQ3 303 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 SLC13A1Q9BZW2 595 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 MTMR12Q9C0I1 747 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 TWSG1Q9GZX9 223 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 OCIAD1Q9NX40 245 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 KCNG1Q9UIX4 513 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 AGO2Q9UKV8 859 aaKnown RBP11.43□□□□□ -0.58
RTN4-211ENST00000438462 INTS6Q9UL03 887 aaKnown RBP11.43□□□□□ -0.58
RTN4-211ENST00000438462 GPR34Q9UPC5 381 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 RPS6KL1Q9Y6S9 549 aa11.43□□□□□ -0.58
RTN4-211ENST00000438462 IGHV5-10-1A0A0J9YXX1 117 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 ANKRD63C9JTQ0 380 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 AP1G2O75843 785 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 STK17BO94768 372 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 CPNE6O95741 557 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 IST1P53990 364 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 PIP5KL1Q5T9C9 394 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 TTC22Q5TAA0 569 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 NEK5Q6P3R8 708 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 PAQR9Q6ZVX9 377 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 TADA2BQ86TJ2 420 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 AGBL5Q8NDL9 886 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 SCG3Q8WXD2 468 aaKnown RBP11.42□□□□□ -0.58
RTN4-211ENST00000438462 HPDLQ96IR7 371 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 CTRCQ99895 268 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 SLCO3A1Q9UIG8 710 aa11.42□□□□□ -0.58
RTN4-211ENST00000438462 NAGPAQ9UK23 515 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms