RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 K7ERQ8 282 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 PPP1R12AO14974 1030 aaPredicted RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 NCAM2O15394 837 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 ZMPSTE24O75844 475 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 KLF8O95600 359 aaPredicted RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 MT-CO1P00395 513 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 DCNP07585 359 aaKnown RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 HLA-EP13747 358 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 MX2P20592 715 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 KIR2DL1P43626 348 aaPredicted RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 NR2C2P49116 596 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 EIF3EP60228 445 aaKnown RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 PDK1Q15118 436 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 PTPRNQ16849 979 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 FBXO43Q4G163 708 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 TMEM31Q5JXX7 168 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 BZW1Q7L1Q6 419 aaKnown RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 USP33Q8TEY7 942 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 LGMNQ99538 433 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 MTG2Q9H4K7 406 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 C10orf88Q9H8K7 445 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 SEPT10Q9P0V9 454 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 UBA2Q9UBT2 640 aaPredicted RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 HCN2Q9UL51 889 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 R3HDM2Q9Y2K5 976 aaKnown RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 FCF1Q9Y324 198 aaKnown RBP15.66■□□□□ 0.1
CNOT9-205ENST00000433439 SHROOM3Q8TF72 1996 aa15.66■□□□□ 0.1
CNOT9-205ENST00000433439 TTC34A8MYJ7 566 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 KIF2AO00139 706 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-205ENST00000433439 MCF2LO15068 1137 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 MAFKO60675 156 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 PRAMEF11O60813 436 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 NEBLO76041 1014 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 SRPRAP08240 638 aaKnown RBP15.65■□□□□ 0.1
CNOT9-205ENST00000433439 IL12RB1P42701 662 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 IL10RBQ08334 325 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 KLF1Q13351 362 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-205ENST00000433439 SNX1Q13596 522 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 NOMO1Q15155 1222 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 FAM182AQ5T1J6 154 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 SDE2Q6IQ49 451 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 PKN3Q6P5Z2 889 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 CCDC105Q8IYK2 499 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 TTC13Q8NBP0 860 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 TXNDC5Q8NBS9 432 aaKnown RBP15.65■□□□□ 0.1
CNOT9-205ENST00000433439 NSMCE1Q8WV22 266 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 C1orf54Q8WWF1 131 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 ATG4AQ8WYN0 398 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 MRGPRX3Q96LB0 322 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 THAP10Q9P2Z0 257 aaPredicted RBP15.65■□□□□ 0.1
CNOT9-205ENST00000433439 SLC8A2Q9UPR5 921 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 STARD13Q9Y3M8 1113 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 RAD54BQ9Y620 910 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 STON1Q9Y6Q2 735 aa15.65■□□□□ 0.1
CNOT9-205ENST00000433439 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 PGRMC1O00264 195 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 SMAD6O43541 496 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 URI1O94763 535 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 SRCP12931 536 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 PRKCHP24723 683 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 SERPINH1P50454 418 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 GEMIN4P57678 1058 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 MRPS21P82921 87 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 DLG2Q15700 870 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 CWF19L1Q69YN2 538 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 TIGD7Q6NT04 549 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 DARS2Q6PI48 645 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 CCDC13Q8IYE1 715 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 ZNF687Q8N1G0 1237 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 RASGEF1CQ8N431 466 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 SH2D3CQ8N5H7 860 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 IL17RCQ8NAC3 791 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 CCDC26Q8TAB7 109 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 TFB1MQ8WVM0 346 aaKnown RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 MAIP1Q8WWC4 291 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 PBXIP1Q96AQ6 731 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 HDAC11Q96DB2 347 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 OLFM3Q96PB7 478 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 AP1M1Q9BXS5 423 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 CEP41Q9BYV8 373 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 TNKS2Q9H2K2 1166 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 POLR3BQ9NW08 1133 aaPredicted RBP15.64■□□□□ 0.09
CNOT9-205ENST00000433439 CHD5Q8TDI0 1954 aa15.64■□□□□ 0.09
CNOT9-205ENST00000433439 FAM86C2PA6NEL3 165 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 ESPNB1AK53 854 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 KCNK1O00180 336 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 PI15O43692 258 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 TMCC1O94876 653 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 EPHX1P07099 455 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 RBP3P10745 1247 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 HNRNPLP14866 589 aaKnown RBP eCLIP15.63■□□□□ 0.09
CNOT9-205ENST00000433439 VAV1P15498 845 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 PRLRP16471 622 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 CCNCP24863 283 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 NTSR1P30989 418 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 SLC20A2Q08357 652 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 PPIDQ08752 370 aaKnown RBP15.63■□□□□ 0.09
CNOT9-205ENST00000433439 SLC10A7Q0GE19 358 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 FZD5Q13467 585 aa15.63■□□□□ 0.09
CNOT9-205ENST00000433439 LBRQ14739 615 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms