RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 HS3ST2Q9Y278 367 aa8.53□□□□□ -1.04
CDH13-203ENST00000431540 TBC1D30Q9Y2I9 924 aa8.53□□□□□ -1.04
CDH13-203ENST00000431540 PAXBP1Q9Y5B6 917 aa8.53□□□□□ -1.04
CDH13-203ENST00000431540 PCDHB4Q9Y5E5 795 aa8.53□□□□□ -1.04
CDH13-203ENST00000431540 SLCO1B1Q9Y6L6 691 aa8.53□□□□□ -1.04
CDH13-203ENST00000431540 UNC13CQ8NB66 2214 aa8.53□□□□□ -1.04
CDH13-203ENST00000431540 CFAP46Q8IYW2 2715 aa8.52□□□□□ -1.04
CDH13-203ENST00000431540 GOLGA6L7A0A1B0GV03 622 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 TTC34A8MYJ7 566 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 KCNK3O14649 394 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 TPP1O14773 563 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 SIAH2O43255 324 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 MSI1O43347 362 aaKnown RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 FGFR1OPO95684 399 aaKnown RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 TRUB2O95900 331 aaKnown RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 F9P00740 461 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 IL1BP01584 269 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 TACR2P21452 398 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 GLDCP23378 1020 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 SGSHP51688 502 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 RPS24P62847 133 aaKnown RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 CDK17Q00537 523 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 FSCBQ5H9T9 825 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 HES3Q5TGS1 186 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 BROXQ5VW32 411 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 ZNF783Q6ZMS7 281 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 ZNF605Q86T29 641 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 SETD3Q86TU7 594 aaPredicted RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 ZDHHC17Q8IUH5 632 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 CCAR2Q8N163 923 aaKnown RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 SDR16C5Q8N3Y7 309 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 ZNF366Q8N895 744 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 TMEM145Q8NBT3 493 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 ZNF606Q8WXB4 792 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 NDRG1Q92597 394 aaKnown RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 RNF34Q969K3 372 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 ERLEC1Q96DZ1 483 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 ALG14Q96F25 216 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 TBATAQ96M53 351 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 PRICKLE1Q96MT3 831 aaPredicted RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 FEM1AQ9BSK4 669 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 HDAC8Q9BY41 377 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 NLGN3Q9NZ94 848 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 STIM2Q9P246 746 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 SERGEFQ9UGK8 458 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 CEP83Q9Y592 693 aa8.52□□□□□ -1.05
CDH13-203ENST00000431540 SMG1Q96Q15 3661 aaKnown RBP8.52□□□□□ -1.05
CDH13-203ENST00000431540 ATMQ13315 3056 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 FAM149AA5PLN7 773 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 FAM47DPA6NHR8 397 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 M0QYV0 167 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 MT-CO3P00414 261 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 PRNPP04156 253 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 SCNN1AP37088 669 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 CDH4P55283 916 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 PCBP4P57723 403 aaKnown RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 HNRNPKP61978 463 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDH13-203ENST00000431540 BNIP3Q12983 259 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 ZNF177Q13360 481 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 DCAF17Q5H9S7 520 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 SPATS2Q86XZ4 545 aaKnown RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 GATAD2AQ86YP4 633 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 LGI2Q8N0V4 545 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 STK40Q8N2I9 435 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 PPM1KQ8N3J5 372 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 SLC25A45Q8N413 288 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 SH2D3CQ8N5H7 860 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 C1orf131Q8NDD1 294 aaKnown RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 ZNF397Q8NF99 534 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 SMARCE1Q969G3 411 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 PGAP3Q96FM1 320 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 PPP1R16AQ96I34 528 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 HIC2Q96JB3 615 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 FCRL3Q96P31 734 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 NOX5Q96PH1 765 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 LENG8Q96PV6 779 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 DEPDC7Q96QD5 511 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 C2orf49Q9BVC5 232 aaPredicted RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
CDH13-203ENST00000431540 SALL4Q9UJQ4 1053 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 PCDHGC3Q9UN70 934 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 NAALADL1Q9UQQ1 740 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 WASF2Q9Y6W5 498 aa8.51□□□□□ -1.05
CDH13-203ENST00000431540 GTPBP10A4D1E9 387 aaKnown RBP8.5□□□□□ -1.05
CDH13-203ENST00000431540 TMX2-CTNND1H3BSU7 103 aa8.5□□□□□ -1.05
CDH13-203ENST00000431540 SCAMP1O15126 338 aa8.5□□□□□ -1.05
CDH13-203ENST00000431540 TLX3O43711 291 aaPredicted RBP8.5□□□□□ -1.05
CDH13-203ENST00000431540 AP1G1O43747 822 aa8.5□□□□□ -1.05
CDH13-203ENST00000431540 HSF2BPO75031 334 aa8.5□□□□□ -1.05
CDH13-203ENST00000431540 TCEA3O75764 348 aa8.5□□□□□ -1.05
CDH13-203ENST00000431540 HNRNPA2B1P22626 353 aaKnown RBP8.5□□□□□ -1.05
CDH13-203ENST00000431540 DGKAP23743 735 aa8.5□□□□□ -1.05
CDH13-203ENST00000431540 AKT2P31751 481 aa8.5□□□□□ -1.05
CDH13-203ENST00000431540 NOS2P35228 1153 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms