RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 KRT1P04264 644 aa20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 PTMAP06454 111 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 NDUFV2P19404 249 aa20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 LINGO4Q6UY18 593 aa20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 METTL3Q86U44 580 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 SYCE1Q8N0S2 351 aa20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 CELF6Q96J87 481 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 CEP44Q9C0F1 390 aa20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 MKRN2Q9H000 416 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 PRDM16Q9HAZ2 1276 aa20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 BCCIPQ9P287 314 aaKnown RBP eCLIP20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.5■□□□□ 0.87
CSNK1E-207ENST00000430335 K7ERQ8 282 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 TNNT1P13805 278 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 PAPOLAP51003 745 aaKnown RBP20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 ELAVL3Q14576 367 aaKnown RBP20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 ACCSLQ4AC99 568 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 ODF2Q5BJF6 829 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 ZNF354CQ86Y25 554 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 TMPRSS6Q8IU80 811 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 KATNAL2Q8IYT4 538 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 PGBD3Q8N328 593 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 CASKIN2Q8WXE0 1202 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 ISG20Q96AZ6 181 aaKnown RBP20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 RNF157Q96PX1 679 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 MTG2Q9H4K7 406 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 RAPGEFL1Q9UHV5 662 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 MFHAS1Q9Y4C4 1052 aa20.49■□□□□ 0.87
CSNK1E-207ENST00000430335 SMAD6O43541 496 aaKnown RBP20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 PALMO75781 387 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 CTNNA2P26232 953 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 CTNNA1P35221 906 aaKnown RBP20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 NBL1P41271 181 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 ZBTB16Q05516 673 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 PAFAH1B3Q15102 231 aaKnown RBP20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 TAZQ16635 292 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 INO80DQ53TQ3 878 aaPredicted RBP20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 NCBP2-AS2Q69YL0 99 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 C22orf39Q6P5X5 142 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 PQLC3Q8N755 202 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 ERLEC1Q96DZ1 483 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 SIPA1Q96FS4 1042 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 TPSD1Q9BZJ3 242 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 RSPH9Q9H1X1 276 aaPredicted RBP20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 PDFQ9HBH1 243 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 GUCA1BQ9UMX6 200 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 PCDHA3Q9Y5H8 950 aa20.48■□□□□ 0.87
CSNK1E-207ENST00000430335 CCDC66A2RUB6 948 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 PRAMEF11O60813 436 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 RNASEH1O60930 286 aaKnown RBP20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 ZNF217O75362 1048 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 VAV1P15498 845 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 BYSLQ13895 437 aaKnown RBP20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 USP39Q53GS9 565 aaKnown RBP20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 ZNF776Q68DI1 518 aaPredicted RBP20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 MFSD7Q6UXD7 560 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 Q6ZVU0 165 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 NT5DC3Q86UY8 548 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 LRRC49Q8IUZ0 686 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 PLPP6Q8IY26 295 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 PCDH20Q8N6Y1 951 aaKnown RBP20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 EXD1Q8NHP7 514 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 GAB3Q8WWW8 586 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 PRCCQ92733 491 aaPredicted RBP20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 KRT35Q92764 455 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 RNF25Q96BH1 459 aaPredicted RBP20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 FAM129BQ96TA1 746 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 SLC6A17Q9H1V8 727 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 KCNF1Q9H3M0 494 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 AMFRQ9UKV5 643 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 PPP2R2CQ9Y2T4 447 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 ACTL7AQ9Y615 435 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 CAPN6Q9Y6Q1 641 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 R4GN57 208 aa20.47■□□□□ 0.87
CSNK1E-207ENST00000430335 DFFAO00273 331 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 ALOX15BO15296 676 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 HRO43593 1189 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 ZNF821O75541 412 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 ZRANB2O95218 330 aaKnown RBP eCLIP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 P2RY2P41231 377 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 MARCKSL1P49006 195 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 RPS14P62263 151 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 NHLH1Q02575 133 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 IL10RBQ08334 325 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 SLC9A4Q6AI14 798 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 KIAA1324Q6UXG2 1013 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 TP53INP2Q8IXH6 220 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 RCOR2Q8IZ40 523 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 STK40Q8N2I9 435 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 RBM41Q96IZ5 413 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 CCDC114Q96M63 670 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 MAK16Q9BXY0 300 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 SEMA4AQ9H3S1 761 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 ITM2CQ9NQX7 267 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 IPO11Q9UI26 975 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 SCML1Q9UN30 329 aa20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 FCF1Q9Y324 198 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 FARP1Q9Y4F1 1045 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-207ENST00000430335 J3KR12 359 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms