RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 PTENP60484 403 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 SDHAF4Q5VUM1 108 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 LPCAT2Q7L5N7 544 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 PARGQ86W56 976 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 ASAH2Q9NR71 780 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 NINJ2Q9NZG7 142 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 ERN1O75460 977 aaKnown RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 SEC23AQ15436 765 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 DNMT3LQ9UJW3 386 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 C1orf232A0A0U1RR37 186 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 FFAR3O14843 346 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 GPR42O15529 346 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 UQCRBP14927 111 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 SRSF11Q05519 484 aaKnown RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 SNAP47Q5SQN1 464 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 FAM83AQ86UY5 434 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 OR10G6Q8NH81 332 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 CXorf56Q9H5V9 222 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 CYLDQ9NQC7 956 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 IL17RBQ9NRM6 502 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 THAP1Q9NVV9 213 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 OR10H1Q9Y4A9 318 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 RNF17Q9BXT8 1623 aaKnown RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 FCHO1O14526 889 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 KCNH1O95259 989 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 ALOX12P18054 663 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 HDCP19113 662 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 LPIN1Q14693 890 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 SVOPQ8N4V2 548 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 STON1Q9Y6Q2 735 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 GSAPA4D1B5 854 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 HACD1B0YJ81 288 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 CLOCKO15516 846 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 RARAP10276 462 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 SNRPD1P62314 119 aaKnown RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 VGLL4Q14135 290 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 AP5B1Q2VPB7 878 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 SLC45A4Q5BKX6 768 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 SNX30Q5VWJ9 437 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 NYAP1Q6ZVC0 841 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 TMEM199Q8N511 208 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 OR52K1Q8NGK4 314 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 ABCG8Q9H221 673 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 OR12D3Q9UGF7 316 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 TBC1D12O60347 775 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 GUCY1B2O75343 617 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 GSTM5P46439 218 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 IRF8Q02556 426 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 PABPC1LQ4VXU2 614 aaKnown RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 PAPD7Q5XG87 772 aaKnown RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 RBM43Q6ZSC3 357 aaKnown RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 EPB41L4BQ9H329 900 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 DCLRE1BQ9H816 532 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 ELL3Q9HB65 397 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 ARIH1Q9Y4X5 557 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 DCXO43602 365 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 PAEPP09466 180 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 ZSCAN5DPP0CG00 497 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 NEK3P51956 506 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 PKNOX1P55347 436 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 HECTD3Q5T447 861 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 IQSEC1Q6DN90 963 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 OR6Y1Q8NGX8 325 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 LRRN4Q8WUT4 740 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 CDRT15Q96T59 188 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 DCUN1D5Q9BTE7 237 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 MLPHQ9BV36 600 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 RXFP1Q9HBX9 757 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 MAT2BQ9NZL9 334 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 TARBP1Q13395 1621 aaKnown RBP15.6■□□□□ 0.09
PTPRF-206ENST00000429895 F8VP50 259 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 VPS4BO75351 444 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 CORO7P57737 925 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 ABRQ12979 859 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 MTAPQ13126 283 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 KLHL23Q8NBE8 558 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 GPR152Q8TDT2 470 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 FERD3LQ96RJ6 166 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 PCDH12Q9NPG4 1184 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 EVA1BQ9NVM1 165 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 KLF15Q9UIH9 416 aa15.6■□□□□ 0.09
PTPRF-206ENST00000429895 ZSCAN5CA6NGD5 496 aaPredicted RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 SNPHO15079 494 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 FKBP6O75344 327 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 PTPRAP18433 802 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 TTC7BQ86TV6 843 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 TMEM86AQ8N2M4 240 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 GPR156Q8NFN8 814 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 HNRNPLLQ8WVV9 542 aaKnown RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 ANAPC2Q9UJX6 822 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 TNFSF13BQ9Y275 285 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 EML1O00423 815 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 MAPKAPK2P49137 400 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 AKIRIN2Q53H80 203 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 GPC2Q8N158 579 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 GNPTGQ9UJJ9 305 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 NR2E3Q9Y5X4 410 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 INO80Q9ULG1 1556 aaPredicted RBP15.59■□□□□ 0.09
PTPRF-206ENST00000429895 BCL10O95999 233 aa15.59■□□□□ 0.09
PTPRF-206ENST00000429895 CATP04040 527 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms