RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MGAT1P26572 445 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 SULT1E1P49888 294 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 PAPOLAP51003 745 aaKnown RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 LIMK2P53671 638 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 RPL10AP62906 217 aaKnown RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 DYNC1I2Q13409 638 aaKnown RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 PCLAFQ15004 111 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 SOWAHAQ2M3V2 549 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 SV2CQ496J9 727 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 FBXO47Q5MNV8 452 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 SYCP2LQ5T4T6 812 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 PDPK2PQ6A1A2 396 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 C16orf89Q6UX73 402 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 ALKAL1Q6UXT8 129 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 ACAD11Q709F0 780 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 ANKRD33Q7Z3H0 272 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 BNIPLQ7Z465 357 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 LIMS2Q7Z4I7 341 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 DHDDSQ86SQ9 333 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 ST13P4Q8IZP2 240 aaPredicted RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 GALNT15Q8N3T1 639 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 TOP6BLQ8N6T0 577 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 C7orf31Q8N865 590 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 CATSPER1Q8NEC5 780 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF483Q8TF39 744 aaPredicted RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 RNF139Q8WU17 664 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 COPS5Q92905 334 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 NT5C3BQ969T7 300 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 NTAN1Q96AB6 310 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 IFT43Q96FT9 208 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 P2RY11Q96G91 374 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 TSNARE1Q96NA8 513 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 PPP1R2P1Q96PQ5 205 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 RBBP8Q99708 897 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 HNRNPABQ99729 332 aaKnown RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 CENPKQ9BS16 269 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 KLHL4Q9C0H6 718 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 PAPOLBQ9NRJ5 636 aaKnown RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 FAM49BQ9NUQ9 324 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 HACD3Q9P035 362 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 VTI1BQ9UEU0 232 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 MARCOQ9UEW3 520 aaPredicted RBP8.87□□□□□ -0.99
GABPB1-205ENST00000429662 SLC4A7Q9Y6M7 1214 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 PLXNA3P51805 1871 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 KMT2EQ8IZD2 1858 aa8.87□□□□□ -0.99
GABPB1-205ENST00000429662 EPOPA6NHQ4 379 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 H3BRB1 525 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 PIRO00625 290 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 NRG2O14511 850 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CASQ2O14958 399 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TRIM13O60858 407 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 HUS1O60921 280 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SKAP2O75563 359 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 AP2A1O95782 977 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 BAG2O95816 211 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 VTNP04004 478 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 LYNP07948 512 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 COL6A2P12110 1019 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 HOXD8P13378 290 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 LCP1P13796 627 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 KCNE1P15382 129 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 GOT1P17174 413 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CDC25CP30307 473 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TAF6P49848 677 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SESN2P58004 480 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF33AQ06730 810 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SCAPQ12770 1279 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ILF2Q12905 390 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 UBAP2LQ14157 1087 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 PRPSAP1Q14558 356 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 RBBP5Q15291 538 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 GRIK4Q16099 956 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF792Q3KQV3 632 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ARL13BQ3SXY8 428 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 XKR4Q5GH76 650 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CES4AQ5XG92 561 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TAPT1Q6NXT6 567 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZFP1Q6P2D0 407 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 EPGNQ6UW88 154 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 IZUMO2Q6UXV1 221 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CATSPER4Q7RTX7 472 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 PID1Q7Z2X4 250 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TMEM135Q86UB9 458 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C10orf107Q8IVU9 208 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 DEFB106AQ8N104 65 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 FBXW8Q8N3Y1 598 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CCDC185Q8N715 623 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 APPL2Q8NEU8 664 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 WNT8BQ93098 351 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 PGBD4Q96DM1 585 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CNDP1Q96KN2 507 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 BTBD9Q96Q07 612 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SLC2A13Q96QE2 648 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 NPY6RQ99463 290 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SORT1Q99523 831 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 EBF4Q9BQW3 602 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C16orf70Q9BSU1 422 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 DUSP16Q9BY84 665 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C20orf27Q9GZN8 174 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms