RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 HIBCHQ6NVY1 386 aaPredicted RBP11.21□□□□□ -0.62
HIPK2-203ENST00000428878 NKD2Q969F2 451 aaPredicted RBP11.21□□□□□ -0.62
HIPK2-203ENST00000428878 ATP6V1E2Q96A05 226 aa11.21□□□□□ -0.62
HIPK2-203ENST00000428878 ZNF778Q96MU6 729 aa11.21□□□□□ -0.62
HIPK2-203ENST00000428878 TLR9Q9NR96 1032 aa11.21□□□□□ -0.62
HIPK2-203ENST00000428878 HACD3Q9P035 362 aa11.21□□□□□ -0.62
HIPK2-203ENST00000428878 WNT6Q9Y6F9 365 aa11.21□□□□□ -0.62
HIPK2-203ENST00000428878 SPTBN2O15020 2390 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 E5RI56 91 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 COCHO43405 550 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CHRM3P20309 590 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 BGNP21810 368 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 IL4RP24394 825 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 NNMTP40261 264 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CCDC197Q8NCU1 140 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 HIPK4Q8NE63 616 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CDC26Q8NHZ8 85 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 SORCS1Q8WY21 1168 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 PHF21BQ96EK2 531 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 ZDHHC6Q9H6R6 413 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 EVLQ9UI08 416 aaPredicted RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 KCTD3Q9Y597 815 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 C2orf71A6NGG8 1288 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 ECHS1P30084 290 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 SLC8A1P32418 973 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 NRIP1P48552 1158 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CSHL1Q14406 222 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 RARS2Q5T160 578 aaKnown RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 HDAC11Q96DB2 347 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CHMP6Q96FZ7 201 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CLSTN3Q9BQT9 956 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 SLC17A7Q9P2U7 560 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 UBA2Q9UBT2 640 aaPredicted RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 DRG1Q9Y295 367 aaKnown RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 PLXNB2O15031 1838 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 KPNA3O00505 521 aaPredicted RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 STX7O15400 261 aaKnown RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 OPHN1O60890 802 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 SNRPAP09012 282 aaKnown RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 NR2C2P49116 596 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 RENBPP51606 427 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CHI3L2Q15782 390 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 TEX44Q53QW1 395 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 CROCCP2Q86T23 111 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 NIPA2Q8N8Q9 360 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 SREK1Q8WXA9 508 aaKnown RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 MTG2Q9H4K7 406 aa11.2□□□□□ -0.62
HIPK2-203ENST00000428878 XAB2Q9HCS7 855 aaKnown RBP11.2□□□□□ -0.62
HIPK2-203ENST00000428878 A0A0G2JMZ2 1700 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ABHD14A-ACY1A0A1B0GW23 586 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 SERPINF2P08697 491 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 TROVE2P10155 538 aaKnown RBP eCLIP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 EPCAMP16422 314 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 PBLDP30039 288 aaPredicted RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 AKT1P31749 480 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 IRS1P35568 1242 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 FDFT1P37268 417 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ATXN3P54252 364 aaPredicted RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 CCDC6Q16204 474 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 MS4A13Q5J8X5 152 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 TRIM68Q6AZZ1 485 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ESRP1Q6NXG1 681 aaKnown RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 PSTKQ8IV42 348 aaKnown RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 DENND6AQ8IWF6 608 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 FLCNQ8NFG4 579 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 PIK3R5Q8WYR1 880 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 BTN2A3PQ96KV6 586 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 RNF38Q9H0F5 515 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 PPARGC1AQ9UBK2 798 aaKnown RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 INSL6Q9Y581 213 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 TRIM24O15164 1050 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 TGM5O43548 720 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 HSPA4LO95757 839 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 TIMP1P01033 207 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ALDH3A1P30838 453 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ERVFC1P60507 584 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 PPIGQ13427 754 aaKnown RBP eCLIP11.19□□□□□ -0.621e-7■■■■■ 31.2
HIPK2-203ENST00000428878 PIK3R6Q5UE93 754 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 DET1Q7L5Y6 550 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 TBC1D1Q86TI0 1168 aaPredicted RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ITIH5Q86UX2 942 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 KCNMB4Q86W47 210 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 PGBD3Q8N328 593 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ZNF473Q8WTR7 871 aaKnown RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 TCEAL4Q96EI5 215 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 K7ERQ8 282 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 EIF3HO15372 352 aaKnown RBP eCLIP11.19□□□□□ -0.622e-6■□□□□ 9.4
HIPK2-203ENST00000428878 ANXA9O76027 345 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ASMTLO95671 621 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 HLA-DQB2P05538 268 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 NMBRP28336 390 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 CASP2P42575 452 aa11.19□□□□□ -0.62
HIPK2-203ENST00000428878 POU5F1Q01860 360 aaKnown RBP11.19□□□□□ -0.62
HIPK2-203ENST00000428878 ENPEPQ07075 957 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms