RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 SPOCD1Q6ZMY3 1216 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 RCOR2Q8IZ40 523 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 EXD1Q8NHP7 514 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 MAK16Q9BXY0 300 aaKnown RBP22.79■■□□□ 1.24
PTPN18-205ENST00000428843 PRSS16Q9NQE7 514 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 EDDM13A0A1B0GTR0 161 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 CXorf51AA0A1B0GTR3 108 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 SMAD6O43541 496 aaKnown RBP22.78■■□□□ 1.24
PTPN18-205ENST00000428843 MFSD11O43934 449 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 SIN3BO75182 1162 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 ALDH1A2O94788 518 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 VAV1P15498 845 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 CDKN2BP42772 138 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 TCF15Q12870 199 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 TAZQ16635 292 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 ZNF528Q3MIS6 628 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 C9orf64Q5T6V5 341 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 HEATR6Q6AI08 1181 aaKnown RBP22.78■■□□□ 1.24
PTPN18-205ENST00000428843 ANO7Q6IWH7 933 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 RFX6Q8HWS3 928 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 REXO1L1PQ8IX06 675 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 HMGB4Q8WW32 186 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 ALG3Q92685 438 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 PTPRN2Q92932 1015 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 RBM41Q96IZ5 413 aaKnown RBP22.78■■□□□ 1.24
PTPN18-205ENST00000428843 PYCARDQ9ULZ3 195 aa22.78■■□□□ 1.24
PTPN18-205ENST00000428843 TARSL2A2RTX5 802 aaKnown RBP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 ZSCAN5CA6NGD5 496 aaPredicted RBP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 MIF4GDA9UHW6 222 aaKnown RBP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 H0Y858 1186 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 J3KR12 359 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 DDX3YO15523 660 aaKnown RBP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 ZSCAN12O43309 604 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 GABRG2P18507 467 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 FNTBP49356 437 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 CLCN6P51797 869 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 COPAP53621 1224 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 RWDD2BP57060 319 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 GEMIN4P57678 1058 aaKnown RBP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 SLC9A4Q6AI14 798 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 ARHGAP36Q6ZRI8 547 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 RASSF3Q86WH2 238 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 CCDC50Q8IVM0 306 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 MDGA1Q8NFP4 955 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 ALS2CR12Q96Q35 445 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 SLC6A17Q9H1V8 727 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 KCNH6Q9H252 994 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 PDFQ9HBH1 243 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 BCCIPQ9P287 314 aaKnown RBP eCLIP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 EBF1Q9UH73 591 aa22.77■■□□□ 1.24
PTPN18-205ENST00000428843 FCF1Q9Y324 198 aaKnown RBP22.77■■□□□ 1.24
PTPN18-205ENST00000428843 APOL1O14791 398 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 PRAMEF11O60813 436 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 KRT10P13645 584 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 NDUFV2P19404 249 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 NRLP54845 237 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 LLGL1Q15334 1064 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 TFDP3Q5H9I0 405 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 KAZNQ674X7 775 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 C22orf39Q6P5X5 142 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 Q6ZVU0 165 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 PGBD3Q8N328 593 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 UBL4BQ8N7F7 174 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 PLD5Q8N7P1 536 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 OR2T3Q8NH03 318 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 NELL1Q92832 810 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 HES6Q96HZ4 224 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 FAM126AQ9BYI3 521 aaPredicted RBP22.76■■□□□ 1.23
PTPN18-205ENST00000428843 MKRN2Q9H000 416 aaKnown RBP22.76■■□□□ 1.23
PTPN18-205ENST00000428843 PRDM16Q9HAZ2 1276 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 TRMT1Q9NXH9 659 aaKnown RBP22.76■■□□□ 1.23
PTPN18-205ENST00000428843 IPO11Q9UI26 975 aaKnown RBP22.76■■□□□ 1.23
PTPN18-205ENST00000428843 EML5Q05BV3 1969 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 SHROOM3Q8TF72 1996 aa22.76■■□□□ 1.23
PTPN18-205ENST00000428843 hCG_1818297A0A087WSY0 165 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 ZBTB24O43167 697 aaPredicted RBP22.75■■□□□ 1.23
PTPN18-205ENST00000428843 MAP3K6O95382 1288 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 ZFXP17010 805 aaPredicted RBP22.75■■□□□ 1.23
PTPN18-205ENST00000428843 GBE1Q04446 702 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 SLC10A2Q12908 348 aaPredicted RBP22.75■■□□□ 1.23
PTPN18-205ENST00000428843 WDR5BQ86VZ2 330 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 STK40Q8N2I9 435 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 MRGPRX1Q96LB2 322 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 TPSD1Q9BZJ3 242 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 CEP44Q9C0F1 390 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 FBRSQ9HAH7 460 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 SP110Q9HB58 689 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 UBA2Q9UBT2 640 aaPredicted RBP22.75■■□□□ 1.23
PTPN18-205ENST00000428843 HCN4Q9Y3Q4 1203 aa22.75■■□□□ 1.23
PTPN18-205ENST00000428843 CCDC163A0A0D9SF12 145 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 AXIN1O15169 862 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 BNIP3LO60238 219 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 ZNF821O75541 412 aaPredicted RBP22.74■■□□□ 1.23
PTPN18-205ENST00000428843 TMCC1O94876 653 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 DNA2P51530 1060 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 COPS2P61201 443 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 DYNLT1P63172 113 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 IL10RBQ08334 325 aa22.74■■□□□ 1.23
PTPN18-205ENST00000428843 GALNT2Q10471 571 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms