RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 INAQ16352 499 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 MAP7D1Q3KQU3 841 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 ANKRD20A4Q4UJ75 823 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 MFSD4BQ5TF39 518 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 OR6B2Q6IFH4 312 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 KLHDC10Q6PID8 442 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 CCDC137Q6PK04 289 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 UGT2A3Q6UWM9 527 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 TRIM67Q6ZTA4 783 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 FAM183BPQ6ZVS7 135 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 LRRC6Q86X45 466 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 PHF13Q86YI8 300 aaPredicted RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 TMPRSS6Q8IU80 811 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 SCUBE3Q8IX30 993 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 MCOLN2Q8IZK6 566 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 CYP4X1Q8N118 509 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 MARVELD2Q8N4S9 558 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 UBL4BQ8N7F7 174 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 UHMK1Q8TAS1 419 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 SNRNP27Q8WVK2 155 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 NDRG1Q92597 394 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 C18orf8Q96DM3 657 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 MRPS26Q9BYN8 205 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 PLGRKTQ9HBL7 147 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 MLXIPLQ9NP71 852 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
CECR3-201ENST00000428828 EYSQ5T1H1 3165 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 CIB2O75838 187 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 GABBR2O75899 941 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 STK10O94804 968 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 LRG1P02750 347 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 TFAP2AP05549 437 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 CALB1P05937 261 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 ATP5BP06576 529 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 USP17L7P0C7H9 530 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 VCLP18206 1134 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 RRM1P23921 792 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 MAN1A1P33908 653 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 PGM1P36871 562 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 RELAQ04206 551 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 DUSP6Q16828 381 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 DNAL1Q4LDG9 190 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 TCEAL5Q5H9L2 206 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 NEPROQ6NW34 567 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 RBM44Q6ZP01 1051 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 Q7L0L9 218 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 TRABD2AQ86V40 505 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 TCEAL8Q8IYN2 117 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 CCDC110Q8TBZ0 833 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 FAM172AQ8WUF8 416 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 SLC22A17Q8WUG5 538 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 SKA1Q96BD8 255 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 ARHGEF26Q96DR7 871 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 PIWIL1Q96J94 861 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 C8orf48Q96LL4 319 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 SLC4A5Q9BY07 1137 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 ULBP1Q9BZM6 244 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 EBF3Q9H4W6 596 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 NSUN3Q9H649 340 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 LRRC19Q9H756 370 aa11.66□□□□□ -0.54
CECR3-201ENST00000428828 FAM32AQ9Y421 112 aaKnown RBP11.66□□□□□ -0.54
CECR3-201ENST00000428828 ANKRD62A6NC57 917 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 CCL16O15467 120 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 PAPSS1O43252 624 aaPredicted RBP11.65□□□□□ -0.54
CECR3-201ENST00000428828 DENRO43583 198 aaKnown RBP11.65□□□□□ -0.54
CECR3-201ENST00000428828 RFPL2O75678 378 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 GRAP2O75791 330 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 TM7SF2O76062 418 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 ACADSBP45954 432 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 ARFIP2P53365 341 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 EPHB3P54753 998 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
CECR3-201ENST00000428828 PTP4A2Q12974 167 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 VEPH1Q14D04 833 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 TAF12Q16514 161 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 FAM102AQ5T9C2 384 aaPredicted RBP11.65□□□□□ -0.54
CECR3-201ENST00000428828 TTC27Q6P3X3 843 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 LRRC8BQ6P9F7 803 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 CCDC149Q6ZUS6 474 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 DENND5BQ6ZUT9 1274 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 OTOAQ7RTW8 1153 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 RASSF3Q86WH2 238 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 XYLT1Q86Y38 959 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 TREML1Q86YW5 311 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
CECR3-201ENST00000428828 SRRM1Q8IYB3 904 aaKnown RBP11.65□□□□□ -0.54
CECR3-201ENST00000428828 TRPC4APQ8TEL6 797 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 KCTD13Q8WZ19 329 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 HSFY1Q96LI6 401 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 NACA2Q9H009 215 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 ARL8BQ9NVJ2 186 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 NUMBLQ9Y6R0 609 aa11.65□□□□□ -0.54
CECR3-201ENST00000428828 SLC38A8A6NNN8 435 aa11.64□□□□□ -0.55
CECR3-201ENST00000428828 RASA4BC9J798 803 aa11.64□□□□□ -0.55
CECR3-201ENST00000428828 TNFRSF10BO14763 440 aa11.64□□□□□ -0.55
CECR3-201ENST00000428828 TP73O15350 636 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms