RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ASNA1O43681 348 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 ALX3O95076 343 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 KCNH1O95259 989 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 AMHP03971 560 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 PRKAA2P54646 552 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 DNASE1L3Q13609 305 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 SEL1L3Q68CR1 1132 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 RFPL4BQ6ZWI9 263 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 TAS2R42Q7RTR8 314 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 Q8N9G6 341 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-206ENST00000428313 ANGPTL6Q8NI99 470 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 EGLN2Q96KS0 407 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 CSF3RQ99062 836 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 NPAS2Q99743 824 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 SDCBP2Q9H190 292 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 UPF3AQ9H1J1 476 aaKnown RBP16.34■□□□□ 0.21
C9orf3-206ENST00000428313 WDR55Q9H6Y2 383 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-206ENST00000428313 FANCEQ9HB96 536 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 KLQ9UEF7 1012 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 ENPP5Q9UJA9 477 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 AFG3L2Q9Y4W6 797 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 RAD54BQ9Y620 910 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 KPNA7A9QM74 516 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 TIPRLO75663 272 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 ALDH1A2O94788 518 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 CRYZL1O95825 349 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 KRT6AP02538 564 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 KRT6BP04259 564 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 ABCB1P08183 1280 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-206ENST00000428313 KCNA2P16389 499 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 CAPGP40121 348 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 BFSP2Q13515 415 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 CUL2Q13617 745 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 ATP6AP1Q15904 470 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 STEAP4Q687X5 459 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 TMEM270Q6UE05 265 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 B3GNT9Q6UX72 402 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 SLC30A10Q6XR72 485 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 C15orf52Q6ZUT6 534 aaKnown RBP16.34■□□□□ 0.21
C9orf3-206ENST00000428313 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 ARMC8Q8IUR7 673 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 HCAR2Q8TDS4 363 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 TP53INP1Q96A56 240 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 BTN2A3PQ96KV6 586 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 OR2B2Q9GZK3 357 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 MUC3BQ9H195 1237 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.34■□□□□ 0.21
C9orf3-206ENST00000428313 TESMINQ9Y4I5 508 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 PCDHAC2Q9Y5I4 1007 aa16.34■□□□□ 0.21
C9orf3-206ENST00000428313 SAC3D1A6NKF1 404 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 DYRK3O43781 588 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 IDH3BO43837 385 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 NR4A2P43354 598 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 NIPAL4Q0D2K0 466 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SMTNL2Q2TAL5 461 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF394Q53GI3 561 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 LDLRAP1Q5SW96 308 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 BROXQ5VW32 411 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SPRED1Q7Z699 444 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 EPHX4Q8IUS5 362 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 LACC1Q8IV20 430 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 MAP4K3Q8IVH8 894 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 MFSD4AQ8N468 514 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 CMASQ8NFW8 434 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SH2D3AQ9BRG2 576 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 RSAD1Q9HA92 442 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 NEK6Q9HC98 313 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 PCDH12Q9NPG4 1184 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 FBXO8Q9NRD0 319 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 IFT80Q9P2H3 777 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-206ENST00000428313 VTI1BQ9UEU0 232 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 RAP2CQ9Y3L5 183 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SPDYE2BA6NHP3 402 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 A6NL46 340 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 E7ENX8 843 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SLCO1B7G3V0H7 640 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SLC16A4O15374 487 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 HOXC11O43248 304 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-206ENST00000428313 LRCH4O75427 683 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 RASAL1O95294 804 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SPDYE6P0CI01 402 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 PSMA2P25787 234 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 IL1R2P27930 398 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SSTR3P32745 418 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-206ENST00000428313 MAPK10P53779 464 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 STX1BP61266 288 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 LRP8Q14114 963 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 DLG2Q15700 870 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SPDYE2Q495Y8 402 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 NAPRTQ6XQN6 538 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 USP51Q70EK9 711 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SFRP1Q8N474 314 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 CYGBQ8WWM9 190 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 RASSF5Q8WWW0 418 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 ZUFSPQ96AP4 578 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 MAELQ96JY0 434 aaKnown RBP16.33■□□□□ 0.2
C9orf3-206ENST00000428313 CLSTN3Q9BQT9 956 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 SEZ6LQ9BYH1 1024 aa16.33■□□□□ 0.2
C9orf3-206ENST00000428313 TRIT1Q9H3H1 467 aaKnown RBP16.33■□□□□ 0.2
C9orf3-206ENST00000428313 CD300AQ9UGN4 299 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms