RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 THTPAQ9BU02 230 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 CARD9Q9H257 536 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 HBS1LQ9Y450 684 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 LGR5O75473 907 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 SLC25A14O95258 325 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 CYP1A1P04798 512 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 CHN1P15882 459 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 NFKB1P19838 968 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 HNF4AP41235 474 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 ABL2P42684 1182 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 DUSP4Q13115 394 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 XKR4Q5GH76 650 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 ARID3BQ8IVW6 561 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 SUN3Q8TAQ9 357 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 METTL6Q8TCB7 284 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 PHF21BQ96EK2 531 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 DDX28Q9NUL7 540 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 BCL9O00512 1426 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 VAPBO95292 243 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 FOXM1Q08050 763 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 ILF3Q12906 894 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 MPPE1Q53F39 396 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 NEK10Q6ZWH5 1172 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 MPP4Q96JB8 637 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 MRIQ9BWK5 157 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 RMI1Q9H9A7 625 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 ASF1AQ9Y294 204 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 ZNF541Q9H0D2 1346 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 ADGRB2O60241 1585 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 COL5A2P05997 1499 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 E5RJQ4 531 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 H0YC42 278 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 H3BNH8 94 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 KCNK1O00180 336 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 SCN2BO60939 215 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 USP1O94782 785 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 IGFALSP35858 605 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 NDUFA9Q16795 377 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 CNSTQ6PJW8 725 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 PAGE2Q7Z2X7 111 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 KRT73Q86Y46 540 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 MSL3Q8N5Y2 521 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 TPCN2Q8NHX9 752 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 PROX1Q92786 737 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 FEM1CQ96JP0 617 aa10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 MRTO4Q9UKD2 239 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-202ENST00000427926 PER2O15055 1255 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 MMP3P08254 477 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 SERPINB5P36952 375 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 CRYMQ14894 314 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 NR1I3Q14994 352 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 RASGRP2Q7LDG7 609 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 NPAS4Q8IUM7 802 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 GALNT4Q8N4A0 578 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 FNDC5Q8NAU1 212 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ARHGEF28Q8N1W1 1705 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 MAFO75444 373 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 PDHA1P08559 390 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ZNF23P17027 643 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 CCT8P50990 548 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 CBX2Q14781 532 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 LYPLAL1Q5VWZ2 237 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 PDPK2PQ6A1A2 396 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ERGIC2Q96RQ1 377 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 FUCA2Q9BTY2 467 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 SMIM35A0A1B0GVV1 85 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 HACD1B0YJ81 288 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 H0Y858 1186 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 HOXB8P17481 243 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 CRABP2P29373 138 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 AKT2P31751 481 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 CD86P42081 329 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 RAD23BP54727 409 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ELP6Q0PNE2 266 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 LRRC36Q1X8D7 754 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 FGD3Q5JSP0 725 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 GPSM1Q86YR5 675 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 WDR36Q8NI36 951 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ETAA1Q9NY74 926 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 SLCO1B7G3V0H7 640 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 RAD51CO43502 376 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 RGS14O43566 566 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 BRCC3P46736 316 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 SUZ12Q15022 739 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 C11orf63Q6NUN7 778 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 CHST9Q7L1S5 443 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 EPHX4Q8IUS5 362 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ATG16L2Q8NAA4 619 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 DPEP2Q9H4A9 486 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 ATP6V1B2P21281 511 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 FXR1P51114 621 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 COPAP53621 1224 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 VAC14Q08AM6 782 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 AP5B1Q2VPB7 878 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 TYW3Q6IPR3 259 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 LRIG3Q6UXM1 1119 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 MAP4K3Q8IVH8 894 aa10.08□□□□□ -0.8
CLTCL1-202ENST00000427926 TTC29Q8NA56 475 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms