RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 AIM2O14862 343 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 RGS14O43566 566 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 MED24O75448 989 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ERCC1P07992 297 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 COL6A1P12109 1028 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ITPKBP27987 946 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 PGM1P36871 562 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 PFKPQ01813 784 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 CHRNB3Q05901 458 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 NFYCQ13952 458 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 MPPE1Q53F39 396 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 WASH2PQ6VEQ5 465 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 SH3BP5LQ7L8J4 393 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 FAM83AQ86UY5 434 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 REPS2Q8NFH8 660 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 MDM1Q8TC05 714 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ASZ1Q8WWH4 475 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 AIFM3Q96NN9 605 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 COQ7Q99807 217 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 PLA2G12BQ9BX93 195 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ATAD3AQ9NVI7 634 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 RBM22Q9NW64 420 aaKnown RBP eCLIP5.82□□□□□ -1.48
HERC4-206ENST00000427635 CLDND1Q9NY35 253 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 AK5Q9Y6K8 562 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 A0A0A6YYK5 440 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 MAGEB16A2A368 324 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 TOR1BO14657 336 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ZNF208O43345 1280 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 CST8O60676 142 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 SNX4O95219 450 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 LDOC1O95751 146 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 MYL12AP19105 171 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 KCNA5P22460 613 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 CSHL1Q14406 222 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ATXN7L2Q5T6C5 722 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 RBM43Q6ZSC3 357 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 SMIM5Q71RC9 77 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 IZUMO1Q8IYV9 350 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 POF1BQ8WVV4 589 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 GPR20Q99678 358 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ALG13Q9NP73 1137 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 MAT2BQ9NZL9 334 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 AP4E1Q9UPM8 1137 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 SDR42E2A6NKP2 422 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 PSTPIP1O43586 416 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 FSBPO95073 299 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 CYB5AP00167 134 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 PCCBP05166 539 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ATP5F1P24539 256 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 ACAT1P24752 427 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 SLC7A2P52569 658 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 EFR3AQ14156 821 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 TSNQ15631 228 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 CNGA2Q16280 664 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 PHF19Q5T6S3 580 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ZC3H14Q6PJT7 736 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 TXNRD3Q86VQ6 643 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 FAM228AQ86W67 206 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 USP38Q8NB14 1042 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 OXER1Q8TDS5 423 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 TRPC4APQ8TEL6 797 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 EME1Q96AY2 570 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 SIKE1Q9BRV8 207 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 CAB39LQ9H9S4 337 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 AGO4Q9HCK5 861 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 RABGEF1Q9UJ41 708 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ARHGEF40Q8TER5 1519 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 NEDD8-MDP1E9PL57 170 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 SLC28A2O43868 658 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 GLRA3O75311 464 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 NOL4O94818 638 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 GLUD2P49448 558 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 CDKN1CP49918 316 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 DGKEP52429 567 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 PSMD4P55036 377 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 PPP2R2AP63151 447 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 RHAGQ02094 409 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ORC1Q13415 861 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 CRY1Q16526 586 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 FGD3Q5JSP0 725 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ACAD10Q6JQN1 1059 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 KRT74Q7RTS7 529 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 UXS1Q8NBZ7 420 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 GMCL1P1Q8NEA9 526 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 OR14C36Q8NHC7 312 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 HEXDCQ8WVB3 486 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 HNRNPLLQ8WVV9 542 aaKnown RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 TIFAQ96CG3 184 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 TPD52L3Q96J77 140 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 HAPLN3Q96S86 360 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 C11orf84Q9BUA3 381 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 FAM126AQ9BYI3 521 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 ILKAPQ9H0C8 392 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 INTS13Q9NVM9 706 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ERVW-1Q9UQF0 538 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 ARHGEF5Q12774 1597 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.81□□□□□ -1.48
HERC4-206ENST00000427635 NFIBO00712 420 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 MATN4O95460 622 aa5.81□□□□□ -1.48
HERC4-206ENST00000427635 CYP17A1P05093 508 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms