RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM217Q8N7C4 229 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 DNAAF1Q8NEP3 725 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 RFWD2Q8NHY2 731 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 SH3KBP1Q96B97 665 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 KIF1BPQ96EK5 621 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 RNFT2Q96EX2 444 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 P2RY11Q96G91 374 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 APOPT1Q96IL0 206 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 PPM1MQ96MI6 270 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 EYA3Q99504 573 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 WACQ9BTA9 647 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 GATA5Q9BWX5 397 aaPredicted RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 NPLQ9BXD5 320 aaPredicted RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 TAOK3Q9H2K8 898 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 TTYH1Q9H313 450 aaPredicted RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 SLC32A1Q9H598 525 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 AAMDCQ9H7C9 122 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 Q9N2J8 555 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 TXNRD2Q9NNW7 524 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 SMC4Q9NTJ3 1288 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM248Q9NWD8 314 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 IRAK4Q9NWZ3 460 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 HEY2Q9UBP5 337 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 PGAP2Q9UHJ9 254 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 CD207Q9UJ71 328 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 DTX4Q9Y2E6 619 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 LY6G6EA0A0G2JKS1 128 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM247A6NEH6 219 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 TSPAN4O14817 238 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 PER2O15055 1255 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 TULP3O75386 442 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 MBD4O95243 580 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 CTSAP10619 480 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ATP1A3P13637 1013 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 TNFAIP3P21580 790 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 CD72P21854 359 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ELF1P32519 619 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 GJC1P36383 396 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 CDH15P55291 814 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ID2Q02363 134 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 PMPCAQ10713 525 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 DDX10Q13206 875 aaKnown RBP2.64□□□□□ -1.99
PTPRC-208ENST00000427110 PGM5Q15124 567 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 KIAA1755Q5JYT7 1200 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 SLC9C2Q5TAH2 1124 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 NAA35Q5VZE5 725 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 AADACL2Q6P093 401 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 B4GALNT4Q76KP1 1039 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 RSRC2Q7L4I2 434 aaKnown RBP2.64□□□□□ -1.99
PTPRC-208ENST00000427110 IGFN1Q86VF2 1251 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ANKRD13BQ86YJ7 626 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 DPP10Q8N608 796 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 SCAIQ8N9R8 606 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 RUFY2Q8WXA3 655 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ST8SIA4Q92187 359 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 CNOT9Q92600 299 aaKnown RBP2.64□□□□□ -1.99
PTPRC-208ENST00000427110 KAT2AQ92830 837 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ZUFSPQ96AP4 578 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ZBTB10Q96DT7 871 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ELP4Q96EB1 424 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 RNF125Q96EQ8 232 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 TUBB6Q9BUF5 446 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 UBA5Q9GZZ9 404 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 PAIP1Q9H074 479 aaKnown RBP2.64□□□□□ -1.99
PTPRC-208ENST00000427110 INTS2Q9H0H0 1204 aaKnown RBP2.64□□□□□ -1.99
PTPRC-208ENST00000427110 UNC45AQ9H3U1 944 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 EPHX3Q9H6B9 360 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 JMJD4Q9H9V9 463 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 IL21RQ9HBE5 538 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 PREBQ9HCU5 417 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ZNF304Q9HCX3 659 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ENTPD7Q9NQZ7 604 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 PAPOLBQ9NRJ5 636 aaKnown RBP2.64□□□□□ -1.99
PTPRC-208ENST00000427110 SLC22A11Q9NSA0 550 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 TMEM45AQ9NWC5 275 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 UTS2RQ9UKP6 389 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 TTC3P53804 2025 aa2.64□□□□□ -1.99
PTPRC-208ENST00000427110 ZNF335Q9H4Z2 1342 aaPredicted RBP2.64□□□□□ -1.99
PTPRC-208ENST00000427110 A0A1W2PPC1 479 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 OR6C68A6NDL8 312 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 FAM90A7PA6NKC0 464 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 FAM90A22PA8MWA6 464 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 FAM90A12PA8MX19 464 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 FAM90A23PA8MXZ1 464 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 FOXO6A8MYZ6 492 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 KCNJ18B7U540 433 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 TNPO2O14787 897 aaKnown RBP2.63□□□□□ -1.99
PTPRC-208ENST00000427110 SPTLC2O15270 562 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 CEP104O60308 925 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 TLR2O60603 784 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 IL1AP01583 271 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 PSG1P11464 419 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 ABCD3P28288 659 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 DDIT3P35638 169 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 GPD2P43304 727 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 PTPN9P43378 593 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 MTNR1AP48039 350 aa2.63□□□□□ -1.99
PTPRC-208ENST00000427110 POLGP54098 1239 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms