RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 ZNF33AQ06730 810 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 CSRP2Q16527 193 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 HADHQ16836 314 aaKnown RBP18.41■□□□□ 0.54
HERC3-205ENST00000426683 C22orf39Q6P5X5 142 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 DSG4Q86SJ6 1040 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 CPNE8Q86YQ8 564 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 SLC41A1Q8IVJ1 513 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 UMODL1-AS1Q8N2C9 162 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 TEKT4Q8WW24 435 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 PIGKQ92643 395 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 HMCESQ96FZ2 354 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 CCDC114Q96M63 670 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 TNKS2Q9H2K2 1166 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 SMOC1Q9H4F8 434 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 FBXL12Q9NXK8 326 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 CWC15Q9P013 229 aaKnown RBP18.41■□□□□ 0.54
HERC3-205ENST00000426683 LCMT1Q9UIC8 334 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 NCKAP1Q9Y2A7 1128 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 FCF1Q9Y324 198 aaKnown RBP18.41■□□□□ 0.54
HERC3-205ENST00000426683 OTOGLQ3ZCN5 2332 aa18.41■□□□□ 0.54
HERC3-205ENST00000426683 A0A1W2PP55 124 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 TMEM110-MUSTN1A8MSY1 372 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 H3BRJ5 948 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 MCF2LO15068 1137 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 ALOX15BO15296 676 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 CD160O95971 181 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 ADH1BP00325 375 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 C5AR1P21730 350 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 ACSL1P33121 698 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 ARL4AP40617 200 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 MAGEA1P43355 309 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 HCAR3P49019 387 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 SFSWAPQ12872 951 aaKnown RBP18.4■□□□□ 0.54
HERC3-205ENST00000426683 MESDQ14696 234 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 PARP15Q460N3 678 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 PLA2G2CQ5R387 149 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 LEKR1Q6ZMV7 388 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 USP30Q70CQ3 517 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 RHOT2Q8IXI1 618 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 CCDC170Q8IYT3 715 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 OR2A12Q8NGT7 310 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 ZNF419Q96HQ0 510 aaPredicted RBP18.4■□□□□ 0.54
HERC3-205ENST00000426683 HSPA12BQ96MM6 686 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 CEP44Q9C0F1 390 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 BTBD1Q9H0C5 482 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 VPS45Q9NRW7 570 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 INTUQ9ULD6 942 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 FARP1Q9Y4F1 1045 aaPredicted RBP18.4■□□□□ 0.54
HERC3-205ENST00000426683 PLXND1Q9Y4D7 1925 aa18.4■□□□□ 0.54
HERC3-205ENST00000426683 ATXN2Q99700 1313 aaKnown RBP18.4■□□□□ 0.54
HERC3-205ENST00000426683 CXorf51AA0A1B0GTR3 108 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 C1QTNF3-AMACRE9PGA6 284 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 BUB1O43683 1085 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 RNASEH2AO75792 299 aaKnown RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 LCA5LO95447 670 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 ZNF806P0C7X5 589 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 ITPKAP23677 461 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 CDC25BP30305 580 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 CYLC1P35663 651 aaPredicted RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 GJC1P36383 396 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 RECQLP46063 649 aaPredicted RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 DNA2P51530 1060 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 NDST2P52849 883 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 DPYSQ14117 519 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 PRR23CQ6ZRP0 262 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 HDDC3Q8N4P3 179 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 AADATQ8N5Z0 425 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 PCDH20Q8N6Y1 951 aaKnown RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 CADM4Q8NFZ8 388 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 RFFLQ8WZ73 363 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 FOXJ1Q92949 421 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 CELF6Q96J87 481 aaKnown RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 OMDQ99983 421 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 SLC39A8Q9C0K1 460 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 KLC2Q9H0B6 622 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 LRRC19Q9H756 370 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 SGK2Q9HBY8 427 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 PCDH18Q9HCL0 1135 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 SERGEFQ9UGK8 458 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 SARDHQ9UL12 918 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 PPM1HQ9ULR3 514 aa18.39■□□□□ 0.53
HERC3-205ENST00000426683 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.39■□□□□ 0.53
HERC3-205ENST00000426683 ABCA7Q8IZY2 2146 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 ZSCAN5CA6NGD5 496 aaPredicted RBP18.38■□□□□ 0.53
HERC3-205ENST00000426683 SOWAHDA6NJG2 315 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 MEI4A8MW99 385 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 MTA2O94776 668 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 SEMA4FO95754 770 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 FECHP22830 423 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 CHRNA3P32297 505 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 MAN1A1P33908 653 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 DPP6P42658 865 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 METAP1P53582 386 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 CDH6P55285 790 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 TAS2R40P59535 323 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 SERINC3Q13530 473 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 KRT81Q14533 505 aa18.38■□□□□ 0.53
HERC3-205ENST00000426683 SF3A2Q15428 464 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms