RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CRYL1Q9Y2S2 319 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 TTC3P53804 2025 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 NRP1O14786 923 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 ACADSP16219 412 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 SPRP35270 261 aaPredicted RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 BST2Q10589 180 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 TMED1Q13445 227 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 TRMT5Q32P41 509 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 LRRC8EQ6NSJ5 796 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 IRGCQ6NXR0 463 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP42-203ENST00000426246 BHLHE22Q8NFJ8 381 aaPredicted RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 OR6Y1Q8NGX8 325 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 PDCD6IPQ8WUM4 868 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 EME1Q96AY2 570 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 DDX43Q9NXZ2 648 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 COPG2Q9UBF2 871 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 GIMAP2Q9UG22 337 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 DNAJA2O60884 412 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 GABBR2O75899 941 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 AKR1A1P14550 325 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 BDNFP23560 247 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 PMLP29590 882 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 GRIA4P48058 902 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 SLC18A2Q05940 514 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 GRM3Q14832 879 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 ARHGAP36Q6ZRI8 547 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 MYLK4Q86YV6 388 aaPredicted RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 CMTM5Q96DZ9 223 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 TKTL2Q9H0I9 626 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 UPF3AQ9H1J1 476 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 WDCPQ9H6R7 721 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 SARS2Q9NP81 518 aaKnown RBP13.62□□□□□ -0.23
USP42-203ENST00000426246 SFMBT1Q9UHJ3 866 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 CDH22Q9UJ99 828 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 STAP1Q9ULZ2 295 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 ARHGAP26Q9UNA1 814 aa13.62□□□□□ -0.23
USP42-203ENST00000426246 MYO7AQ13402 2215 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 ZBTB14O43829 449 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 B3GAT3O94766 335 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 ENDOD1O94919 500 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 JUNP05412 331 aaKnown RBP13.61□□□□□ -0.23
USP42-203ENST00000426246 COX4I1P13073 169 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 GP5P40197 560 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 SNX16P57768 344 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 PRKCZQ05513 592 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 RPS6KA2Q15349 733 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 ANO4Q32M45 955 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 URGCPQ8TCY9 931 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 FICDQ9BVA6 458 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 GATA5Q9BWX5 397 aaPredicted RBP13.61□□□□□ -0.23
USP42-203ENST00000426246 CYLDQ9NQC7 956 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 POMPQ9Y244 141 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 E7ESA3 106 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 RPL10P27635 214 aaKnown RBP13.61□□□□□ -0.23
USP42-203ENST00000426246 ARRB2P32121 409 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 FLT3LGP49771 235 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 SERPINB9P50453 376 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 BCAT1P54687 386 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 ARL13AQ5H913 290 aaPredicted RBP13.61□□□□□ -0.23
USP42-203ENST00000426246 GK5Q6ZS86 529 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 MIB1Q86YT6 1006 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 FNIP1Q8TF40 1166 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 KLHL4Q9C0H6 718 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 ILKAPQ9H0C8 392 aaPredicted RBP13.61□□□□□ -0.23
USP42-203ENST00000426246 ASB7Q9H672 318 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 NME7Q9Y5B8 376 aa13.61□□□□□ -0.23
USP42-203ENST00000426246 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 SUPT3HO75486 399 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 SERPINA6P08185 405 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 PSEN1P49768 467 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 FCGRTP55899 365 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 IRX1P78414 480 aaPredicted RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 SOX4Q06945 474 aaPredicted RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 PCLAFQ15004 111 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 FUT11Q495W5 492 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 ZNF470Q6ECI4 717 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 TMC7Q7Z402 723 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 DHDDSQ86SQ9 333 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 VPS39Q96JC1 886 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 CYP2S1Q96SQ9 504 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 SH3GL3Q99963 347 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 CYP3A43Q9HB55 503 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 IRAK4Q9NWZ3 460 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 XPR1Q9UBH6 696 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 DSEQ9UL01 958 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 CRCPO75575 148 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 OR4Q2P0C623 313 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 FGF3P11487 239 aaPredicted RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 DARSP14868 501 aaKnown RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 CRHR1P34998 444 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 NSUN2Q08J23 767 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP42-203ENST00000426246 TRIM67Q6ZTA4 783 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 NT5DC4Q86YG4 428 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 LIN28AQ9H9Z2 209 aaKnown RBP13.6□□□□□ -0.23
USP42-203ENST00000426246 PPCSQ9HAB8 311 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 SLC2A6Q9UGQ3 507 aa13.6□□□□□ -0.23
USP42-203ENST00000426246 SMIM28A0A1B0GU29 152 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms