RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 NYNRINQ9P2P1 1898 aaKnown RBP16.1■□□□□ 0.17
SCRN1-205ENST00000425819 RAB21Q9UL25 225 aa16.1■□□□□ 0.17
SCRN1-205ENST00000425819 NFU1Q9UMS0 254 aa16.1■□□□□ 0.17
SCRN1-205ENST00000425819 REV3LO60673 3130 aa16.1■□□□□ 0.17
SCRN1-205ENST00000425819 DOCK8Q8NF50 2099 aa16.1■□□□□ 0.17
SCRN1-205ENST00000425819 OTOL1A6NHN0 477 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 C2CD4DB7Z1M9 353 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 DNALI1O14645 258 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ZBTB24O43167 697 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 HOXC11O43248 304 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 MYBL2P10244 700 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 MCM3P25205 808 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 HLA-FP30511 346 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 GDI1P31150 447 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 PLTPP55058 493 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 SLC10A7Q0GE19 358 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 CUL1Q13616 776 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ZDHHC24Q6UX98 284 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 CNTD1Q8N815 330 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ZNF419Q96HQ0 510 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 LMLNQ96KR4 655 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 VAT1Q99536 393 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 IL12RB2Q99665 862 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TRMT61BQ9BVS5 477 aaKnown RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 NEUROG2Q9H2A3 272 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ECT2Q9H8V3 914 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ETNK1Q9HBU6 452 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 WHRNQ9P202 907 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TRHDEQ9UKU6 1024 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TPX2Q9ULW0 747 aaKnown RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TTLL3Q9Y4R7 772 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TRIM24O15164 1050 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 HLA-DQB2P05538 268 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TUBBP07437 444 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ITIH2P19823 946 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 PSMB4P28070 264 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TNFRSF8P28908 595 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 CD68P34810 354 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 RENBPP51606 427 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 HTR4Q13639 388 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 HNRNPDQ14103 355 aaKnown RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 LBRQ14739 615 aaKnown RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 PLEKHG6Q3KR16 790 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 PITRM1Q5JRX3 1037 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 SYCP2LQ5T4T6 812 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TMCO4Q5TGY1 634 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 MARC1Q5VT66 337 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 LINGO4Q6UY18 593 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 C4orf22Q6V702 233 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 C12orf40Q86WS4 652 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 DCAF4L2Q8NA75 395 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 BBOF1Q8ND07 529 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 CPT1BQ92523 772 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 FATE1Q969F0 183 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 TEKT5Q96M29 485 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 UBA2Q9UBT2 640 aaPredicted RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 RSPH14Q9UHP6 348 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 VPS51Q9UID3 782 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 ANAPC5Q9UJX4 755 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 GGA2Q9UJY4 613 aa16.09■□□□□ 0.17
SCRN1-205ENST00000425819 INTS6Q9UL03 887 aaKnown RBP16.09■□□□□ 0.17
SCRN1-205ENST00000425819 SZT2Q5T011 3432 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 ANHXE9PGG2 379 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 CHADO15335 359 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 CACNG3O60359 315 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 ZMPSTE24O75844 475 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 PABPC1P11940 636 aaKnown RBP16.08■□□□□ 0.16
SCRN1-205ENST00000425819 NFKB1P19838 968 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 ECHS1P30084 290 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 MMP13P45452 471 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 ARF5P84085 180 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 RUNX3Q13761 415 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 FUT11Q495W5 492 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 RNASEH2BQ5TBB1 312 aaKnown RBP16.08■□□□□ 0.16
SCRN1-205ENST00000425819 ITPRIPL1Q6GPH6 555 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 CPA6Q8N4T0 437 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 FBXO25Q8TCJ0 367 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 ART4Q93070 314 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 ZNF599Q96NL3 588 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.16
SCRN1-205ENST00000425819 C2orf49Q9BVC5 232 aaPredicted RBP16.08■□□□□ 0.16
SCRN1-205ENST00000425819 NT5MQ9NPB1 228 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 GTSE1Q9NYZ3 720 aa16.08■□□□□ 0.16
SCRN1-205ENST00000425819 BRWD1Q9NSI6 2320 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 TP73O15350 636 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 FDFT1P37268 417 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 PLK1P53350 603 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 SLC12A1Q13621 1099 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 GAB4Q2WGN9 574 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 ANKRD22Q5VYY1 191 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 HIBCHQ6NVY1 386 aaPredicted RBP16.07■□□□□ 0.16
SCRN1-205ENST00000425819 TEX26Q8N6G2 289 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
SCRN1-205ENST00000425819 PHF7Q9BWX1 381 aaPredicted RBP16.07■□□□□ 0.16
SCRN1-205ENST00000425819 SLC2A11Q9BYW1 496 aa16.07■□□□□ 0.16
SCRN1-205ENST00000425819 GBA3Q9H227 469 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms