RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NOS2P35228 1153 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 ADCYAP1R1P41586 468 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 MAP3K7CLP57077 242 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 CYTH1Q15438 398 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 NRF1Q16656 503 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 NADK2Q4G0N4 442 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SMYD5Q6GMV2 418 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 PDZD4Q76G19 769 aaPredicted RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 TMEM135Q86UB9 458 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC41A1Q8IVJ1 513 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 LILRA2Q8N149 483 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 NCSTNQ92542 709 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 HAPLN3Q96S86 360 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 EFCAB1Q9HAE3 211 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 GRID2O43424 1007 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 NELFEP18615 380 aaKnown RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 ADRA1BP35368 520 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 PPARGP37231 505 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 CTBP1Q13363 440 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 GRIK4Q16099 956 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 ZNF423Q2M1K9 1284 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 CRYBG2Q8N1P7 616 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 SNX31Q8N9S9 440 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 RNF169Q8NCN4 708 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 SNX27Q96L92 541 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 RNF39Q9H2S5 420 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 SUDS3Q9H7L9 328 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 GTSE1Q9NYZ3 720 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 PRPF19Q9UMS4 504 aaKnown RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 TRIP11Q15643 1979 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 ADM5C9JUS6 153 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 FZD9O00144 591 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 DDHD2O94830 711 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 CSPG5O95196 566 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 SMIM18P0DKX4 95 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 CD68P34810 354 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 SCN1AP35498 2009 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 DPP6P42658 865 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 TKTL1P51854 596 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 ZBTB17Q13105 803 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 PRKAA1Q13131 559 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 ADGRE1Q14246 886 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 ANO4Q32M45 955 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 LIPMQ5VYY2 423 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 LAYNQ6UX15 382 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 OTOP3Q7RTS5 596 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 IFNLR1Q8IU57 520 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 DENND6AQ8IWF6 608 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 FSTL5Q8N475 847 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 LRRC52Q8N7C0 313 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 WNT8BQ93098 351 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 MLPHQ9BV36 600 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 DRC3Q9H069 523 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 ANLNQ9NQW6 1124 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 RCOR3Q9P2K3 495 aaPredicted RBP7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 BCAP29Q9UHQ4 241 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 TBC1D30Q9Y2I9 924 aa7.65□□□□□ -1.18
SMARCC1-202ENST00000425518 NRP1O14786 923 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 VAPBO95292 243 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 HNRNPLP14866 589 aaKnown RBP eCLIP7.65□□□□□ -1.197e-8■■□□□ 12.9
SMARCC1-202ENST00000425518 ARSAP15289 507 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 CDKL1Q00532 357 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 POU6F1Q14863 301 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 PAFAH1B3Q15102 231 aaKnown RBP7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 DCAF4L1Q3SXM0 396 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 PIGGQ5H8A4 983 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 OTUD1Q5VV17 481 aaPredicted RBP7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC27A1Q6PCB7 646 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 ZYG11AQ6WRX3 759 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 CLEC14AQ86T13 490 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 MARVELD2Q8N4S9 558 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 NPWQ8N729 165 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 PDCD6IPQ8WUM4 868 aaKnown RBP7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 EDEM1Q92611 657 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 RNF34Q969K3 372 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 EME1Q96AY2 570 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 NXNL1Q96CM4 212 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 TNIP3Q96KP6 325 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 PCDHAC1Q9H158 963 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 PLEKHA5Q9HAU0 1116 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 CYP4F12Q9HCS2 524 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 IRAK4Q9NWZ3 460 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 DDIT4Q9NX09 232 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 NDUFA13Q9P0J0 144 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 XPR1Q9UBH6 696 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 MID2Q9UJV3 735 aa7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 UBQLN1Q9UMX0 589 aaKnown RBP7.65□□□□□ -1.19
SMARCC1-202ENST00000425518 SMIM28A0A1B0GU29 152 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 NEMP2A6NFY4 417 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 XPO1O14980 1071 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DCLK1O15075 740 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 VILLO15195 856 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DENRO43583 198 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DLX3O60479 287 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 CABYRO75952 493 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 MT-CO1P00395 513 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 AHSGP02765 367 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 NCAM1P13591 858 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 CYP2B6P20813 491 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms