RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ERN2Q76MJ5 926 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SETD3Q86TU7 594 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SLC25A45Q8N413 288 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARL14Q8N4G2 192 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 FAM131CQ96AQ9 280 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 IL36AQ9UHA7 158 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 XPO7Q9UIA9 1087 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CNTN6Q9UQ52 1028 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CSNK1G3Q9Y6M4 447 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CKAP5Q14008 2032 aa12.57□□□□□ -0.4
HLA-DQB3-203ENST00000425319 AKAP13Q12802 2813 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CPED1A4D0V7 1026 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 M0QYT0 321 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TRIM38O00635 465 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CSO75390 466 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PIAS2O75928 621 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 MPOP05164 745 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 RABIFP47224 123 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 DNA2P51530 1060 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NEK3P51956 506 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PMS1P54277 932 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 VAC14Q08AM6 782 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 BRMS1LQ5PSV4 323 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARHGAP40Q5TG30 622 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 AGBL4Q5VU57 503 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ISM2Q6H9L7 571 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZCCHC8Q6NZY4 707 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 Q6ZSR6 202 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 KANSL1Q7Z3B3 1105 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARHGEF19Q8IW93 802 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ELOA2Q8IYF1 753 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 FMR1NBQ8N0W7 255 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 FAM181AQ8N9Y4 354 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NELFBQ8WX92 580 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SCG3Q8WXD2 468 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 KLK6Q92876 244 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 KAT5Q92993 513 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARHGEF26Q96DR7 871 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 MYEOVQ96EZ4 313 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 APOLD1Q96LR9 279 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PRMT1Q99873 361 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 MYOCQ99972 504 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SLC17A9Q9BYT1 436 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 WDR70Q9NW82 654 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SARDHQ9UL12 918 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 HS3ST2Q9Y278 367 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TBC1D30Q9Y2I9 924 aa12.56□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TMX2-CTNND1H3BSU7 103 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 DXOO77932 396 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 IGLV3-25P01717 112 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PLA2G2AP14555 144 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PRLRP16471 622 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 OR1E1P30953 314 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ETFBP38117 255 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 NUMBP49757 651 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 THOP1P52888 689 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 GEMIN4P57678 1058 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PDCLQ13371 301 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARHGAP44Q17R89 818 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ARSIQ5FYB1 569 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CXorf57Q6NSI4 855 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ESRP1Q6NXG1 681 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 GBP6Q6ZN66 633 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PTAR1Q7Z6K3 402 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ERICH1Q86X53 443 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 CIR1Q86X95 450 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZNF843Q8N446 348 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 C1orf131Q8NDD1 294 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 LMO3Q8TAP4 145 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SPATA20Q8TB22 786 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 IFI44Q8TCB0 444 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 RAB7BQ96AH8 199 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 HEPHQ9BQS7 1158 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZSWIM1Q9BR11 485 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SPON2Q9BUD6 331 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 C1QTNF7Q9BXJ2 289 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 HDAC8Q9BY41 377 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 HPCAL4Q9UM19 191 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 DOLKQ9UPQ8 538 aa12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 COL5A1P20908 1838 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PTPRBP23467 1997 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 C10orf142B7Z368 130 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TPP1O14773 563 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 TSPAN6O43657 245 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PAGE1O75459 146 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ADCY5O95622 1261 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PAK4O96013 591 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SRCP12931 536 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 SLC6A3Q01959 620 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 DEUP1Q05D60 604 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 RAD51Q06609 339 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 PAK1Q13153 545 aa12.54□□□□□ -0.4
HLA-DQB3-203ENST00000425319 ZNF284Q2VY69 593 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms