RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 NHSL2Q5HYW2 709 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ZFP1Q6P2D0 407 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ZNF534Q76KX8 674 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 CDR2LQ86X02 465 aaPredicted RBP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 MAP4K3Q8IVH8 894 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ANKRD36BP1Q96IX9 119 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 AGAP2Q99490 1192 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 SLC8A2Q9UPR5 921 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 XYLBO75191 536 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 GMNNO75496 209 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ELK4P28324 431 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 RAD23AP54725 363 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 MYL6P60660 151 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 NFATC3Q12968 1075 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 NDUFA5Q16718 116 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 HHIPL2Q6UWX4 724 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 ZBTB33Q86T24 672 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 OR9I1Q8NGQ6 314 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 EBNA1BP2Q99848 306 aaKnown RBP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 VPS45Q9NRW7 570 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 MFHAS1Q9Y4C4 1052 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 CEP350Q5VT06 3117 aa11.48□□□□□ -0.57
SEC61A1-202ENST00000424880 PLIN4Q96Q06 1357 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 A0A087WXM4 84 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TCRBV5S1A1TA0A578 114 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 C9IYK1 514 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 PIGNO95427 931 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TSHRP16473 764 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TNFSF9P41273 254 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TUFMP49411 452 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 IFITM3Q01628 133 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 STILQ15468 1287 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 CA9Q16790 459 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 ENOSF1Q7L5Y1 443 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TAS1R3Q7RTX0 852 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 CCNYL1Q8N7R7 359 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TMEM35BQ8NCS4 154 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 GATA5Q9BWX5 397 aaPredicted RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 IMPG2Q9BZV3 1241 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TXNDC16Q9P2K2 825 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 GNPTGQ9UJJ9 305 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 CNOT6Q9ULM6 557 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 IQCA1LA6NCM1 817 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 FAM159BA6NKW6 160 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 AP3B1O00203 1094 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 DYNC1LI2O43237 492 aaPredicted RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 GLRA3O75311 464 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 CALB1P05937 261 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 GLDCP23378 1020 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 MGAT1P26572 445 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 GNL1P36915 607 aaPredicted RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TUBA4AP68366 448 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 ARL13AQ5H913 290 aaPredicted RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 GLRA4Q5JXX5 417 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 LRRC38Q5VT99 294 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 DCAF4Q8WV16 495 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TMEM143Q96AN5 459 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 DGCR6LQ9BY27 220 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 MTMR12Q9C0I1 747 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 NOL6Q9H6R4 1146 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 FANCEQ9HB96 536 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 ITM2CQ9NQX7 267 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 CISHQ9NSE2 258 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 WARS2Q9UGM6 360 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 SCAF8Q9UPN6 1271 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 MICAL3Q7RTP6 2002 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 ATP6AP2A0A1C7CYW4 349 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 YDJCA8MPS7 323 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 NFIBO00712 420 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 AXIN1O15169 862 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 PMM2O15305 246 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 DHX15O43143 795 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 FAM189A1O60320 539 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 ATP6AP2O75787 350 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 KRT7P08729 469 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 ZBTB17Q13105 803 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 IFNEQ86WN2 208 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 UBA3Q8TBC4 463 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TMC2Q8TDI7 906 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 HTRA1Q92743 480 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TFAP2CQ92754 450 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 BHMTQ93088 406 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 CSF3RQ99062 836 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TARS2Q9BW92 718 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 MRPL46Q9H2W6 279 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 EFCAB1Q9HAE3 211 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 NGRNQ9NPE2 291 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 PI4KBQ9UBF8 816 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 CPQQ9Y646 472 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 COPG1Q9Y678 874 aaKnown RBP11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TLL2Q9Y6L7 1015 aa11.47□□□□□ -0.57
SEC61A1-202ENST00000424880 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms