RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 CAMK2GQ13555 558 aaPredicted RBP21.04■□□□□ 0.96
PMS1-211ENST00000424766 DLG2Q15700 870 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 PPP2R5EQ16537 467 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 HNRNPA1L2Q32P51 320 aaKnown RBP21.04■□□□□ 0.96
PMS1-211ENST00000424766 LINGO4Q6UY18 593 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 METTL3Q86U44 580 aaKnown RBP21.04■□□□□ 0.96
PMS1-211ENST00000424766 RFX6Q8HWS3 928 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 CCDC50Q8IVM0 306 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 MAML2Q8IZL2 1156 aaPredicted RBP21.04■□□□□ 0.96
PMS1-211ENST00000424766 ATP11CQ8NB49 1132 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 CASKIN2Q8WXE0 1202 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 CD248Q9HCU0 757 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 POLR3BQ9NW08 1133 aaPredicted RBP21.04■□□□□ 0.96
PMS1-211ENST00000424766 PACSIN2Q9UNF0 486 aaPredicted RBP21.04■□□□□ 0.96
PMS1-211ENST00000424766 RAD54BQ9Y620 910 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 SHROOM3Q8TF72 1996 aa21.04■□□□□ 0.96
PMS1-211ENST00000424766 hCG_1818297A0A087WSY0 165 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 EDDM13A0A1B0GTR0 161 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 K7ESF4 209 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 APOL1O14791 398 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 PRAMEF11O60813 436 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 CD160O95971 181 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 HLA-EP13747 358 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 PTPN7P35236 360 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 SERPINH1P50454 418 aaKnown RBP21.03■□□□□ 0.96
PMS1-211ENST00000424766 ACCSLQ4AC99 568 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 INO80DQ53TQ3 878 aaPredicted RBP21.03■□□□□ 0.96
PMS1-211ENST00000424766 TP53INP2Q8IXH6 220 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 PLD5Q8N7P1 536 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 FRS2Q8WU20 508 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 FBRSQ9HAH7 460 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 KCND1Q9NSA2 647 aa21.03■□□□□ 0.96
PMS1-211ENST00000424766 ZBTB24O43167 697 aaPredicted RBP21.02■□□□□ 0.96
PMS1-211ENST00000424766 SMAD6O43541 496 aaKnown RBP21.02■□□□□ 0.96
PMS1-211ENST00000424766 MFSD11O43934 449 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 ALDH1A2O94788 518 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 PYGMP11217 842 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 KRT10P13645 584 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 COL9A1P20849 921 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 IL10RBQ08334 325 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 RPS6KA1Q15418 735 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 KIAA1211LQ6NV74 962 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 TSTD1Q8NFU3 115 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 PTPRN2Q92932 1015 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 ISG20Q96AZ6 181 aaKnown RBP21.02■□□□□ 0.96
PMS1-211ENST00000424766 CEP44Q9C0F1 390 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 PRSS16Q9NQE7 514 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 EBF1Q9UH73 591 aa21.02■□□□□ 0.96
PMS1-211ENST00000424766 IPO11Q9UI26 975 aaKnown RBP21.02■□□□□ 0.96
PMS1-211ENST00000424766 J3KR12 359 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 K7ERQ8 282 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 CST8O60676 142 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 APBB3O95704 486 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 TDGF1P13385 188 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 MX2P20592 715 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 NR2C2P49116 596 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 NRLP54845 237 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 CSTF1Q05048 431 aaKnown RBP21.01■□□□□ 0.95
PMS1-211ENST00000424766 GALNT2Q10471 571 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 SLC10A2Q12908 348 aaPredicted RBP21.01■□□□□ 0.95
PMS1-211ENST00000424766 ANGPT1Q15389 498 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 ZNF528Q3MIS6 628 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 C9orf64Q5T6V5 341 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 KAZNQ674X7 775 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 BZW1Q7L1Q6 419 aaKnown RBP21.01■□□□□ 0.95
PMS1-211ENST00000424766 PLPP6Q8IY26 295 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 ZNF366Q8N895 744 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 NETO2Q8NC67 525 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 ZNF599Q96NL3 588 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 TSGA13Q96PP4 275 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 HHIPQ96QV1 700 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 FAM126AQ9BYI3 521 aaPredicted RBP21.01■□□□□ 0.95
PMS1-211ENST00000424766 OSBPL8Q9BZF1 889 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 KCNH6Q9H252 994 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 PDFQ9HBH1 243 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 DTLQ9NZJ0 730 aa21.01■□□□□ 0.95
PMS1-211ENST00000424766 UBA2Q9UBT2 640 aaPredicted RBP21.01■□□□□ 0.95
PMS1-211ENST00000424766 CCDC163A0A0D9SF12 145 aa21■□□□□ 0.95
PMS1-211ENST00000424766 USP27XA6NNY8 438 aa21■□□□□ 0.95
PMS1-211ENST00000424766 KIF5CO60282 957 aa21■□□□□ 0.95
PMS1-211ENST00000424766 MAFKO60675 156 aa21■□□□□ 0.95
PMS1-211ENST00000424766 SIN3BO75182 1162 aa21■□□□□ 0.95
PMS1-211ENST00000424766 C7P10643 843 aa21■□□□□ 0.95
PMS1-211ENST00000424766 TGM2P21980 687 aa21■□□□□ 0.95
PMS1-211ENST00000424766 MSNP26038 577 aaKnown RBP21■□□□□ 0.95
PMS1-211ENST00000424766 GARSP41250 739 aaKnown RBP21■□□□□ 0.95
PMS1-211ENST00000424766 GBE1Q04446 702 aa21■□□□□ 0.95
PMS1-211ENST00000424766 ZNF569Q5MCW4 686 aa21■□□□□ 0.95
PMS1-211ENST00000424766 ARHGAP36Q6ZRI8 547 aa21■□□□□ 0.95
PMS1-211ENST00000424766 BBS12Q6ZW61 710 aa21■□□□□ 0.95
PMS1-211ENST00000424766 RASSF3Q86WH2 238 aa21■□□□□ 0.95
PMS1-211ENST00000424766 ATPAF2Q8N5M1 289 aa21■□□□□ 0.95
PMS1-211ENST00000424766 PCDH20Q8N6Y1 951 aaKnown RBP21■□□□□ 0.95
PMS1-211ENST00000424766 OR2T3Q8NH03 318 aa21■□□□□ 0.95
PMS1-211ENST00000424766 MTG2Q9H4K7 406 aa21■□□□□ 0.95
PMS1-211ENST00000424766 SP110Q9HB58 689 aa21■□□□□ 0.95
PMS1-211ENST00000424766 JRKLQ9Y4A0 524 aa21■□□□□ 0.95
PMS1-211ENST00000424766 ACTL7AQ9Y615 435 aa21■□□□□ 0.95
PMS1-211ENST00000424766 TCRBV21S2A2A0A5A6 115 aa20.99■□□□□ 0.95
PMS1-211ENST00000424766 ZNF821O75541 412 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms