RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PTPRN2Q92932 1015 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 FAM122AQ96E09 287 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 CALR3Q96L12 384 aaKnown RBP16.09■□□□□ 0.17
BRAT1-202ENST00000421712 CCDC114Q96M63 670 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 PHOX2BQ99453 314 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 MAK16Q9BXY0 300 aaKnown RBP16.09■□□□□ 0.17
BRAT1-202ENST00000421712 SEMA4AQ9H3S1 761 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 CD248Q9HCU0 757 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 RCOR3Q9P2K3 495 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-202ENST00000421712 SALL4Q9UJQ4 1053 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 ACTL7AQ9Y615 435 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 CACNA1HO95180 2353 aa16.09■□□□□ 0.17
BRAT1-202ENST00000421712 MACROD2A1Z1Q3 448 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 ZSCAN5CA6NGD5 496 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 PJA2O43164 708 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 SMAD6O43541 496 aaKnown RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 KRT1P04264 644 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 KDELR1P24390 212 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 SERPINH1P50454 418 aaKnown RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 VASPP50552 380 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 PAPOLAP51003 745 aaKnown RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 ARSEP51690 589 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 CLCN6P51797 869 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 SERINC3Q13530 473 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 GSE1Q14687 1217 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 LRRC38Q5VT99 294 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 MMAAQ8IVH4 418 aaKnown RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 RYBPQ8N488 228 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 FAM160A2Q8N612 972 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 FRS2Q8WU20 508 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 OR8D1Q8WZ84 308 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 RAPGEF5Q92565 580 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 KLC2Q9H0B6 622 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 TNKS2Q9H2K2 1166 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 LRRC19Q9H756 370 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 DDX56Q9NY93 547 aaKnown RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 TRIM10Q9UDY6 481 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 CYP8B1Q9UNU6 501 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 FCF1Q9Y324 198 aaKnown RBP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.08■□□□□ 0.16
BRAT1-202ENST00000421712 MFHAS1Q9Y4C4 1052 aa16.08■□□□□ 0.16
BRAT1-202ENST00000421712 CKAP5Q14008 2032 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 NDUFS2O75306 463 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 IL1BP01584 269 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 LMNAP02545 664 aaKnown RBP16.07■□□□□ 0.16
BRAT1-202ENST00000421712 IL4RP24394 825 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 SERPINB6P35237 376 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 PSMD8P48556 350 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 RPS14P62263 151 aaKnown RBP16.07■□□□□ 0.16
BRAT1-202ENST00000421712 ELAVL3Q14576 367 aaKnown RBP16.07■□□□□ 0.16
BRAT1-202ENST00000421712 ANKRD20A8PQ5CZ79 823 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 C11orf63Q6NUN7 778 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 C22orf39Q6P5X5 142 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 DSG4Q86SJ6 1040 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 FAM124AQ86V42 546 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 C11orf74Q86VG3 221 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 NPWQ8N729 165 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 FRMD1Q8N878 549 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 FAM71BQ8TC56 605 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 KIAA1524Q8TCG1 905 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.07■□□□□ 0.16
BRAT1-202ENST00000421712 TSC1Q92574 1164 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
BRAT1-202ENST00000421712 ZNF670Q9BS34 389 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 TSGA10Q9BZW7 698 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 RSPH9Q9H1X1 276 aaPredicted RBP16.07■□□□□ 0.16
BRAT1-202ENST00000421712 SP110Q9HB58 689 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 ETNK2Q9NVF9 386 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 NCKAP1Q9Y2A7 1128 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
BRAT1-202ENST00000421712 MUC22E2RYF6 1773 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-202ENST00000421712 A0A0U1RQJ8 604 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 J3KR12 359 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 PSTPIP1O43586 416 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 RHOBTB1O94844 696 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 P2RY2P41231 377 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 ELF2Q15723 593 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 MAP7D1Q3KQU3 841 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 TTC31Q49AM3 519 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-202ENST00000421712 SLC36A4Q6YBV0 504 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 KBTBD6Q86V97 674 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 ARHGAP12Q8IWW6 846 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 PCDH20Q8N6Y1 951 aaKnown RBP16.06■□□□□ 0.16
BRAT1-202ENST00000421712 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 OMDQ99983 421 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 HINFPQ9BQA5 517 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 TM6SF2Q9BZW4 377 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 CEP44Q9C0F1 390 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 EPC1Q9H2F5 836 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 CD93Q9NPY3 652 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 ITM2CQ9NQX7 267 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 UBA2Q9UBT2 640 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-202ENST00000421712 SMG5Q9UPR3 1016 aaKnown RBP16.06■□□□□ 0.16
BRAT1-202ENST00000421712 FANCMQ8IYD8 2048 aa16.06■□□□□ 0.16
BRAT1-202ENST00000421712 C1QTNF3-AMACRE9PGA6 284 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 MID1O15344 667 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 KRT86O43790 486 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 TMCC1O94876 653 aa16.05■□□□□ 0.16
BRAT1-202ENST00000421712 CCDC175P0C221 793 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms