RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 HOXB8P17481 243 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 GUCA1AP43080 201 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 POU5F1Q01860 360 aaKnown RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 LRRC32Q14392 662 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 GRAMD1BQ3KR37 738 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 ZNF470Q6ECI4 717 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 SLC39A5Q6ZMH5 540 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 FAM162AQ96A26 154 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 TMCO1Q9UM00 188 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 CRYL1Q9Y2S2 319 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 DDX3XO00571 662 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 CILPO75339 1184 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 GUCY1B2O75343 617 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 ALPPL2P10696 532 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 GOT1P17174 413 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 DAB2P98082 770 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 OR14C36Q8NHC7 312 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 CEP70Q8NHQ1 597 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 SEMA3CQ99985 751 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 SLC2A4P14672 509 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 GCKP35557 465 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 HTRA3P83110 453 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 CUL3Q13618 768 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 FAM187BQ17R55 369 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 LCA5Q86VQ0 697 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 C4orf32Q8N8J7 132 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 FAM126AQ9BYI3 521 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 MARCOQ9UEW3 520 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 CAPN6Q9Y6Q1 641 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 CYP1A2P05177 515 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 PYGMP11217 842 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 GLRBP48167 497 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 NRIP1P48552 1158 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 SERPINB4P48594 390 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 IL2P60568 153 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 AFTPHQ6ULP2 937 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 RBBP8Q99708 897 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 SNRNP25Q9BV90 132 aaKnown RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 KLRC4O43908 158 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 TPH1P17752 444 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 TM4SF4P48230 202 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 CCDC153Q494R4 210 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 ATP6AP1LQ52LC2 224 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 MARK2Q7KZI7 788 aaKnown RBP10.9□□□□□ -0.66
PTCH1-206ENST00000421141 WDR48Q8TAF3 677 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 UBE2E3Q969T4 207 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 KCNF1Q9H3M0 494 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 COMMD8Q9NX08 183 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 SQORQ9Y6N5 450 aa10.9□□□□□ -0.66
PTCH1-206ENST00000421141 KRT6AP02538 564 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 KRT6BP04259 564 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 CXCR2P25025 360 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 RFX3P48380 749 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 KRT6CP48668 564 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 C1orf127Q8N9H9 656 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 TNFRSF25Q93038 417 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 TUBGCP3Q96CW5 907 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 TEPSINQ96N21 525 aa10.9□□□□□ -0.67
PTCH1-206ENST00000421141 A0A087X1B8 175 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CCNT2O60583 730 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 MFSD7Q6UXD7 560 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 SHC3Q92529 594 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PDLIM2Q96JY6 352 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 TMPRSS4Q9NRS4 437 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 URADA6NGE7 173 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 ATG13O75143 517 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 SLC25A14O95258 325 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 RPL17P18621 184 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 FMO4P31512 558 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 IRF5Q13568 498 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CSHL1Q14406 222 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 LRRC38Q5VT99 294 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PRR23BQ6ZRT6 265 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 TRIB2Q92519 343 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 SUSD3Q96L08 255 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 ECSITQ9BQ95 431 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 NAB1Q13506 487 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CYP2A13Q16696 494 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CELF5Q8N6W0 485 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 ATL1Q8WXF7 558 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 SGF29Q96ES7 293 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 NR1H4Q96RI1 486 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 A0A1B0GVM2 712 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 TCAF2A6NFQ2 919 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 MSI1O43347 362 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 PSMB4P28070 264 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 SKOR1P84550 965 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 POLNQ7Z5Q5 900 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 CLYBLQ8N0X4 340 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 HERVK_113Q902F9 699 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 KAT5Q92993 513 aa10.89□□□□□ -0.67
PTCH1-206ENST00000421141 DACT3Q96B18 629 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
PTCH1-206ENST00000421141 VIPAS39Q9H9C1 493 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms