RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CYFIP2Q96F07 1278 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 DUSP16Q9BY84 665 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 UBXN6Q9BZV1 441 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 HMGXB4Q9UGU5 601 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 APOBEC3BQ9UH17 382 aaKnown RBP9.27□□□□□ -0.93
TRIM39-206ENST00000420746 RABGEF1Q9UJ41 708 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 ENTPD4Q9Y227 616 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 MAP4K5Q9Y4K4 846 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 CEP83Q9Y592 693 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 TDRD6O60522 2096 aaKnown RBP9.27□□□□□ -0.93
TRIM39-206ENST00000420746 FRMD3A2A2Y4 597 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 POM121BA6NF01 834 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 YY2O15391 372 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 NKX2-8O15522 239 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 IGLV3-27P01718 113 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 PRF1P14222 555 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 VAV1P15498 845 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 PNLIPP16233 465 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 UGT1A3P35503 534 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 AP3M2P53677 418 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 ADKP55263 362 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 CYP24A1Q07973 514 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 INCA1Q0VD86 236 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 EIF2B5Q13144 721 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 SLC12A1Q13621 1099 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 PDE1CQ14123 709 aaPredicted RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 FAM133BQ5BKY9 247 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 PRRT3Q5FWE3 981 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 PM20D1Q6GTS8 502 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 RFWD3Q6PCD5 774 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 SCARA5Q6ZMJ2 495 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 ASB18Q6ZVZ8 466 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 TMPRSS9Q7Z410 1059 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 CCNJLQ8IV13 435 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 UNC45BQ8IWX7 931 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 CACNA2D3Q8IZS8 1091 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 SCG3Q8WXD2 468 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 JPH3Q8WXH2 748 aaPredicted RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 KLK6Q92876 244 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 RPL10LQ96L21 214 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 PRICKLE1Q96MT3 831 aaPredicted RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 LENG8Q96PV6 779 aaPredicted RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 TAAR9Q96RI9 348 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 DDX50Q9BQ39 737 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 LRRC61Q9BV99 259 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 IPO11Q9UI26 975 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 ERRFI1Q9UJM3 462 aaPredicted RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 APPL1Q9UKG1 709 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 ZFR2Q9UPR6 939 aaKnown RBP9.26□□□□□ -0.93
TRIM39-206ENST00000420746 HIVEP3Q5T1R4 2406 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 ESPL1Q14674 2120 aa9.26□□□□□ -0.93
TRIM39-206ENST00000420746 HGSO14964 777 aaPredicted RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 ATP9BO43861 1147 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 ACSL4O60488 711 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 PHACTR2O75167 634 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 LUC7L3O95232 432 aaKnown RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 ARSDP51689 593 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 COPB1P53618 953 aaKnown RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 HMGN5P82970 282 aaKnown RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 PTK2BQ14289 1009 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 ZXDCQ2QGD7 858 aaPredicted RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 FSCBQ5H9T9 825 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 KIAA1161Q6NSJ0 714 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 PHACTR4Q8IZ21 702 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 FSTL5Q8N475 847 aaPredicted RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 CARNMT1Q8N4J0 409 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 KYQ8NBH2 561 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 RASSF8Q8NHQ8 419 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 ERCC4Q92889 916 aaPredicted RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 KIAA1143Q96AT1 154 aaPredicted RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 CCDC127Q96BQ5 260 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 DNAJC19Q96DA6 116 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 TCTN2Q96GX1 697 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 LLPHQ9BRT6 129 aaKnown RBP9.25□□□□□ -0.93
TRIM39-206ENST00000420746 DDA1Q9BW61 102 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 SLC17A9Q9BYT1 436 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 SLC29A3Q9BZD2 475 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 DNAI2Q9GZS0 605 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 RUBCNLQ9H714 662 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 TBC1D7Q9P0N9 293 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 STIM2Q9P246 746 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 STK17AQ9UEE5 414 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 RNF215Q9Y6U7 377 aa9.25□□□□□ -0.93
TRIM39-206ENST00000420746 SDK2Q58EX2 2172 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 NIPBLQ6KC79 2804 aaeCLIP9.24□□□□□ -0.93
TRIM39-206ENST00000420746 SPG11Q96JI7 2443 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 HEATR9A2RTY3 570 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 M0QYT0 321 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 FPGTO14772 594 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 SPINT1O43278 529 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 DUX1O43812 170 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 RAD1O60671 282 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 SORBS2O94875 1100 aaKnown RBP9.24□□□□□ -0.93
TRIM39-206ENST00000420746 ZBED1O96006 694 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 PRKAR1AP10644 381 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 TSHRP16473 764 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 NR1D1P20393 614 aa9.24□□□□□ -0.93
TRIM39-206ENST00000420746 VARSP26640 1264 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms