RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CALN1Q9BXU9 219 aa10.48□□□□□ -0.73
TNFAIP3-202ENST00000420009 FZD3Q9NPG1 666 aa10.48□□□□□ -0.73
TNFAIP3-202ENST00000420009 EVA1BQ9NVM1 165 aa10.48□□□□□ -0.73
TNFAIP3-202ENST00000420009 SATB2Q9UPW6 733 aa10.48□□□□□ -0.73
TNFAIP3-202ENST00000420009 PCDHB4Q9Y5E5 795 aa10.48□□□□□ -0.73
TNFAIP3-202ENST00000420009 PCDHGA8Q9Y5G5 932 aa10.48□□□□□ -0.73
TNFAIP3-202ENST00000420009 BOD1L1Q8NFC6 3051 aa10.48□□□□□ -0.73
TNFAIP3-202ENST00000420009 DOCK9Q9BZ29 2069 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 NEMP2A6NFY4 417 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 CDRT15L2A8MXV6 281 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 KCNU1A8MYU2 1149 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 TRUB2O95900 331 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 CTSLP07711 333 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 TGM2P21980 687 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 DUSP3P51452 185 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 IRAK1P51617 712 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 CLDN2P57739 230 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 CENPCQ03188 943 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 TMEM259Q4ZIN3 620 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 C3orf38Q5JPI3 329 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 RABGAP1LQ5R372 815 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 KIAA1614Q5VZ46 1190 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 ZCCHC8Q6NZY4 707 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 KRBA2Q6ZNG9 492 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 SH2D3CQ8N5H7 860 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 ATP6V0D2Q8N8Y2 350 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 ZNF548Q8NEK5 533 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 KLK6Q92876 244 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 NT5C1BQ96P26 610 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 FEM1AQ9BSK4 669 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 DUSP23Q9BVJ7 150 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 ABCG4Q9H172 646 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 POPDC2Q9HBU9 364 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 SLC25A13Q9UJS0 675 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 ZFR2Q9UPR6 939 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 HS3ST2Q9Y278 367 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 ENTPD2Q9Y5L3 495 aa10.47□□□□□ -0.73
TNFAIP3-202ENST00000420009 PMS2P1A4D2B8 440 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 A6NNZ2 444 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 PMM2O15305 246 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 NEBLO76041 1014 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 NME1P15531 152 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 RBMS1P29558 406 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 MLLT3P42568 568 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ACADSBP45954 432 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 FMO5P49326 533 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 PMS1P54277 932 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 HNRNPKP61978 463 aaKnown RBP eCLIP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 NUCB2P80303 420 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 FKBP3Q00688 224 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 CLN3Q13286 438 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 MEA1Q16626 185 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ACCSLQ4AC99 568 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 COBLL1Q53SF7 1204 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ZNF542PQ5EBM4 170 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 SEL1L3Q68CR1 1132 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 FBXL22Q6P050 247 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 GUSBP11Q6P575 273 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 KYAT3Q6YP21 454 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 CLEC14AQ86T13 490 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 PPM1KQ8N3J5 372 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 OR2A12Q8NGT7 310 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 LMO3Q8TAP4 145 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 FAM174AQ8TBP5 190 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 STK32AQ8WU08 396 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ARRDC3Q96B67 414 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ATXN7L3BQ96GX2 97 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 PPP1R9BQ96SB3 815 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 SLC4A5Q9BY07 1137 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 OSBPL2Q9H1P3 480 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ST7Q9NRC1 585 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 DNAJC28Q9NX36 388 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 NCKIPSDQ9NZQ3 722 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ARMCX3Q9UH62 379 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 VPS28Q9UK41 221 aa10.46□□□□□ -0.73
TNFAIP3-202ENST00000420009 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 EME2A4GXA9 379 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 E5RJQ4 531 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 RNF103O00237 685 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 KPNA3O00505 521 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 TCEA3O75764 348 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 CSF2P04141 144 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 SLC2A3P11169 496 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 SRCP12931 536 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 KRT10P13645 584 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZNF18P17022 549 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 CHRNA3P32297 505 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 PRCPP42785 496 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 CSRP3P50461 194 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 PDX1P52945 283 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 YWHAZP63104 245 aaKnown RBP10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 GCNT1Q02742 428 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZNF177Q13360 481 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 AUHQ13825 339 aaKnown RBP10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 FGL2Q14314 439 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 FZD2Q14332 565 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 CDKN3Q16667 212 aa10.45□□□□□ -0.74
TNFAIP3-202ENST00000420009 ANKRD40Q6AI12 368 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms