RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ETFBP38117 255 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 SPECC1LQ69YQ0 1117 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 RETSATQ6NUM9 610 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 DSG4Q86SJ6 1040 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 OMDQ99983 421 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 ACE2Q9BYF1 805 aaPredicted RBP20.78■□□□□ 0.92
GTF3A-202ENST00000419181 NEUROG2Q9H2A3 272 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 ARHGAP20Q9P2F6 1191 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 DNAI1Q9UI46 699 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 PPM1HQ9ULR3 514 aa20.78■□□□□ 0.92
GTF3A-202ENST00000419181 A0A087X0T9 212 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 CXorf51AA0A1B0GTR3 108 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 C4orf47A7E2U8 309 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 FAM228BP0C875 321 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 KCNA4P22459 653 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 EPHB2P29323 1055 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 DRD3P35462 400 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 ACVRL1P37023 503 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 SERPINH1P50454 418 aaKnown RBP20.77■□□□□ 0.92
GTF3A-202ENST00000419181 ARF5P84085 180 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 GFPT1Q06210 699 aaPredicted RBP20.77■□□□□ 0.92
GTF3A-202ENST00000419181 C22orf39Q6P5X5 142 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 RTL3Q8N8U3 475 aaKnown RBP20.77■□□□□ 0.92
GTF3A-202ENST00000419181 OR2A12Q8NGT7 310 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 C1orf216Q8TAB5 229 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 ARHGEF2Q92974 986 aaKnown RBP20.77■□□□□ 0.92
GTF3A-202ENST00000419181 FAM131CQ96AQ9 280 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 BIRC7Q96CA5 298 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 EPAS1Q99814 870 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 MAGEH1Q9H213 219 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 MRPL47Q9HD33 250 aaKnown RBP20.77■□□□□ 0.92
GTF3A-202ENST00000419181 FSCN3Q9NQT6 498 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 MYO1AQ9UBC5 1043 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 EIF2B4Q9UI10 523 aaKnown RBP20.77■□□□□ 0.92
GTF3A-202ENST00000419181 SARDHQ9UL12 918 aa20.77■□□□□ 0.92
GTF3A-202ENST00000419181 NCOR2Q9Y618 2525 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 ASCC3Q8N3C0 2202 aaKnown RBP20.76■□□□□ 0.91
GTF3A-202ENST00000419181 A0A1B0GTW7 788 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 C10orf142B7Z368 130 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 CREB3O43889 395 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 GOT1P17174 413 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 METAP1P53582 386 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 GALCP54803 685 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 SLC20A2Q08357 652 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 TRIM14Q14142 442 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 VSTM4Q8IW00 320 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 HDDC3Q8N4P3 179 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 ZCCHC9Q8N567 271 aaKnown RBP20.76■□□□□ 0.91
GTF3A-202ENST00000419181 PEBP4Q96S96 227 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 MIR1-1HGQ9H1L0 117 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 AP4E1Q9UPM8 1137 aa20.76■□□□□ 0.91
GTF3A-202ENST00000419181 ARHGAP33O14559 1287 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 BNIP3LO60238 219 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 RAMP2O60895 175 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 LRCH4O75427 683 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 ZNF821O75541 412 aaPredicted RBP20.75■□□□□ 0.91
GTF3A-202ENST00000419181 RNF8O76064 485 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 CD160O95971 181 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 HTR7P34969 479 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 MAPK8P45983 427 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 PPM1JQ5JR12 505 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 FAM46CQ5VWP2 391 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 NCEH1Q6PIU2 408 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 CYP4V2Q6ZWL3 525 aaPredicted RBP20.75■□□□□ 0.91
GTF3A-202ENST00000419181 PIP4K2CQ8TBX8 421 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 SNX19Q92543 992 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 CCDC114Q96M63 670 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 DNAJC7Q99615 494 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 CEP44Q9C0F1 390 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 THAP2Q9H0W7 228 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 NOL6Q9H6R4 1146 aaKnown RBP20.75■□□□□ 0.91
GTF3A-202ENST00000419181 GPATCH2LQ9NWQ4 482 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 NENFQ9UMX5 172 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 SLCO1B1Q9Y6L6 691 aa20.75■□□□□ 0.91
GTF3A-202ENST00000419181 LRRC72A6NJI9 287 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 WASH4PA8MWX3 477 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 EIF3CLB5ME19 914 aaKnown RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 C1QTNF3-AMACRE9PGA6 284 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 BCAT2O15382 392 aaPredicted RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 FGF10O15520 208 aaPredicted RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 FSBPO95073 299 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 IGHV4-34P06331 123 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 CTSLP07711 333 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 MIPP30301 263 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 ADPRHP54922 357 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 POLD3Q15054 466 aaPredicted RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 ERMARDQ5T6L9 678 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 DAB2IPQ5VWQ8 1189 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 KIAA0895LQ68EN5 471 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 ALKBH5Q6P6C2 394 aaKnown RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 OR2T34Q8NGX1 318 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 EIF3CQ99613 913 aaKnown RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 ORAI3Q9BRQ5 295 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 SNRNP25Q9BV90 132 aaKnown RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 TNKS2Q9H2K2 1166 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 CATSPERBQ9H7T0 1116 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 OSGEPQ9NPF4 335 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 PCSK1NQ9UHG2 260 aa20.74■□□□□ 0.91
GTF3A-202ENST00000419181 FARP1Q9Y4F1 1045 aaPredicted RBP20.74■□□□□ 0.91
GTF3A-202ENST00000419181 ACTL7AQ9Y615 435 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms