RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 AGO1Q9UL18 857 aaKnown RBP6.09□□□□□ -1.43
HMGB3-202ENST00000419110 PLAAQ9Y263 795 aa6.09□□□□□ -1.43
HMGB3-202ENST00000419110 MRPS23Q9Y3D9 190 aaKnown RBP6.09□□□□□ -1.43
HMGB3-202ENST00000419110 ZFP37Q9Y6Q3 630 aaPredicted RBP6.09□□□□□ -1.43
HMGB3-202ENST00000419110 COL4A2P08572 1712 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 BRWD1Q9NSI6 2320 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 TCF20Q9UGU0 1960 aaKnown RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 TMEM265A0A087WTH1 108 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 A0A087WUV0 522 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 GOLGA6L7A0A1B0GV03 622 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 EXOC1LA0A1B0GW35 172 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 E2F8A0AVK6 867 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ILVBLA1L0T0 632 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 DRGXA6NNA5 263 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 GOLGA8KD6RF30 607 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 F5H423 210 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 H0Y626 953 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 LEFTY2O00292 366 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 SLC9A3R1O14745 358 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 PER2O15055 1255 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 MATN3O15232 486 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 PSMD3O43242 534 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 RIPK2O43353 540 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 TBL1XO60907 577 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 SASH3O75995 380 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ANXA9O76027 345 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CNTN5O94779 1100 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 AP2A1O95782 977 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 HLA-DQB2P05538 268 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 MYZAPP0CAP1 466 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CCNB1P14635 433 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 TCF3P15923 654 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 TSHRP16473 764 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 GJA1P17302 382 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CA4P22748 312 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ATP5DP30049 168 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 STX2P32856 288 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CHKAP35790 457 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 MAGEA4P43358 317 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 MMP13P45452 471 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 IFNAR2P48551 515 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 PAPOLAP51003 745 aaKnown RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 RENBPP51606 427 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 NRLP54845 237 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 GEMP55040 296 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 RPS24P62847 133 aaKnown RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 GNA12Q03113 381 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 IL10RBQ08334 325 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 PDIA2Q13087 525 aaKnown RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CAMK1Q14012 370 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ZNF77Q15935 545 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 UAP1Q16222 522 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 KCTD19Q17RG1 926 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 SLC5A9Q2M3M2 681 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 PARP6Q2NL67 630 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 KRT71Q3SY84 523 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 BBS9Q3SYG4 887 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CCDC38Q502W7 563 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 MPPE1Q53F39 396 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 PRSS36Q5K4E3 855 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 RARS2Q5T160 578 aaKnown RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 STXBP5Q5T5C0 1151 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ZNF697Q5TEC3 545 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ANKRD22Q5VYY1 191 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 IL31Q6EBC2 164 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 NAPEPLDQ6IQ20 393 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 B4GALNT4Q76KP1 1039 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 GET4Q7L5D6 327 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 GRASPQ7Z6J2 395 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 LINC00523Q86TU6 105 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 RBM23Q86U06 439 aaKnown RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 RELL1Q8IUW5 271 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 FAM217AQ8IXS0 508 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CARNMT1Q8N4J0 409 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 DCAF4L2Q8NA75 395 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 NETO2Q8NC67 525 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 SH3RF2Q8TEC5 729 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 USP33Q8TEY7 942 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ING5Q8WYH8 240 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 MAML1Q92585 1016 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ZNF707Q96C28 371 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 OTUB2Q96DC9 234 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 LRRC39Q96DD0 335 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 TCEAL4Q96EI5 215 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 AGAP3Q96P47 875 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 SERPINB12Q96P63 405 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ZIM3Q96PE6 472 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 SLC22A12Q96S37 553 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 C2orf49Q9BVC5 232 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 CINPQ9BW66 212 aaPredicted RBP6.08□□□□□ -1.44
HMGB3-202ENST00000419110 TXLNGYQ9BZA5 131 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 SLC39A8Q9C0K1 460 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 RNF38Q9H0F5 515 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ADAM7Q9H2U9 754 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 VPS37BQ9H9H4 285 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 PPCSQ9HAB8 311 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ETNK1Q9HBU6 452 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 ATP13A1Q9HD20 1204 aa6.08□□□□□ -1.44
HMGB3-202ENST00000419110 NINJ2Q9NZG7 142 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms