RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 BIRC3Q13489 604 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 NCOA4Q13772 614 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 PDE1CQ14123 709 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-205ENST00000419020 PRRT3Q5FWE3 981 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 TMEM164Q5U3C3 297 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 BHLHA9Q7RTU4 235 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 KYQ8NBH2 561 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 HJURPQ8NCD3 748 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-205ENST00000419020 CPT1CQ8TCG5 803 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 GPBAR1Q8TDU6 330 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 NDRG1Q92597 394 aaKnown RBP11.92□□□□□ -0.5
DDX39B-205ENST00000419020 HEXIM2Q96MH2 286 aaKnown RBP11.92□□□□□ -0.5
DDX39B-205ENST00000419020 LRRC61Q9BV99 259 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 IRX2Q9BZI1 471 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-205ENST00000419020 B3GNT4Q9C0J1 378 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 CLPBQ9H078 707 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 LRRN3Q9H3W5 708 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 SPASTQ9UBP0 616 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 GULP1Q9UBP9 304 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 APOBEC3BQ9UH17 382 aaKnown RBP11.92□□□□□ -0.5
DDX39B-205ENST00000419020 IPO11Q9UI26 975 aaKnown RBP11.92□□□□□ -0.5
DDX39B-205ENST00000419020 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
DDX39B-205ENST00000419020 SHANK1Q9Y566 2161 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 C1QTNF3-AMACRE9PGA6 284 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 RAD51BO15315 384 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 MOCS3O95396 460 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 VNN1O95497 513 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 ANXA6P08133 673 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 IDEP14735 1019 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 HOXD13P35453 343 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 NNMTP40261 264 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 RABIFP47224 123 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 CASP4P49662 377 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 CDC20Q12834 499 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 SEPT6Q14141 434 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 EIF2S3LQ2VIR3 472 aaKnown RBP11.91□□□□□ -0.5
DDX39B-205ENST00000419020 DEFB109BQ30KR1 87 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 TMEM259Q4ZIN3 620 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 RAB41Q5JT25 222 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 NADSYN1Q6IA69 706 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 CFAP52Q8N1V2 620 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 ARL10Q8N8L6 244 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 BTN2A2Q8WVV5 523 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 EDEM1Q92611 657 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 TCTN2Q96GX1 697 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 SRRTQ9BXP5 876 aaKnown RBP11.91□□□□□ -0.5
DDX39B-205ENST00000419020 CDH19Q9H159 772 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 SIRPGQ9P1W8 387 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 PNMA8BQ9ULN7 279 aaPredicted RBP11.91□□□□□ -0.5
DDX39B-205ENST00000419020 ABCA2Q9BZC7 2435 aa11.91□□□□□ -0.5
DDX39B-205ENST00000419020 SPG11Q96JI7 2443 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 FRMD3A2A2Y4 597 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 MCF2LO15068 1137 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 ACSL4O60488 711 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 PCDH8O95206 1070 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 ZBED1O96006 694 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 LDLRP01130 860 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 IGLV3-27P01718 113 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 CCL4P13236 92 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 P4HA1P13674 534 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 TRIM21P19474 475 aaKnown RBP11.9□□□□□ -0.5
DDX39B-205ENST00000419020 OAS2P29728 719 aaKnown RBP11.9□□□□□ -0.5
DDX39B-205ENST00000419020 UGT1A3P35503 534 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 ASPAP45381 313 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 SLC11A2P49281 568 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 PPP1R26Q5T8A7 1209 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-205ENST00000419020 PM20D1Q6GTS8 502 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 PIGZQ86VD9 579 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 RNF139Q8WU17 664 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 PDCD6IPQ8WUM4 868 aaKnown RBP11.9□□□□□ -0.5
DDX39B-205ENST00000419020 PMEPA1Q969W9 287 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 SLC45A3Q96JT2 553 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 LLPHQ9BRT6 129 aaKnown RBP11.9□□□□□ -0.5
DDX39B-205ENST00000419020 ERRFI1Q9UJM3 462 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-205ENST00000419020 RNF215Q9Y6U7 377 aa11.9□□□□□ -0.5
DDX39B-205ENST00000419020 TRPM6Q9BX84 2022 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 TYW5A2RUC4 315 aaKnown RBP11.89□□□□□ -0.51
DDX39B-205ENST00000419020 LUC7L3O95232 432 aaKnown RBP11.89□□□□□ -0.51
DDX39B-205ENST00000419020 PAK4O96013 591 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-205ENST00000419020 CELA2BP08218 269 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-205ENST00000419020 TSHRP16473 764 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 ZNF18P17022 549 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 CYP2J2P51589 502 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 TKTL1P51854 596 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 INCA1Q0VD86 236 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 MRPL49Q13405 166 aaKnown RBP11.89□□□□□ -0.51
DDX39B-205ENST00000419020 C16orf72Q14CZ0 275 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 SPOPLQ6IQ16 392 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 TCTN3Q6NUS6 607 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 ASB18Q6ZVZ8 466 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 TIPARPQ7Z3E1 657 aaKnown RBP11.89□□□□□ -0.51
DDX39B-205ENST00000419020 CCNJLQ8IV13 435 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 SLITRK4Q8IW52 837 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 CCDC117Q8IWD4 279 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-205ENST00000419020 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 CACNA2D3Q8IZS8 1091 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 SLC34A3Q8N130 599 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 PLEKHO2Q8TD55 490 aa11.89□□□□□ -0.51
DDX39B-205ENST00000419020 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms