RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 NMBRP28336 390 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 CEACAM7Q14002 265 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 TTLL12Q14166 644 aaPredicted RBP15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 MOB2Q70IA6 237 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 ARMCX2Q7L311 632 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 HAPLN3Q96S86 360 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 STAP1Q9ULZ2 295 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 CDYLQ9Y232 598 aa15.44■□□□□ 0.06
SEMA3B-203ENST00000419007 SMIM31A0A1B0GVY4 71 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 RANBP1P43487 201 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 CTU1Q7Z7A3 348 aaKnown RBP15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 TMEM135Q86UB9 458 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 GPC2Q8N158 579 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 NCSTNQ92542 709 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 SNX27Q96L92 541 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 OSMRQ99650 979 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 PRPF19Q9UMS4 504 aaKnown RBP15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 GNEQ9Y223 722 aaKnown RBP15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 SNX10Q9Y5X0 201 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 PEX1O43933 1283 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 PPARGP37231 505 aaPredicted RBP15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 SPNS2Q8IVW8 549 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 CELF6Q96J87 481 aaKnown RBP15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 HSFY1Q96LI6 401 aa15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 RCOR3Q9P2K3 495 aaPredicted RBP15.43■□□□□ 0.06
SEMA3B-203ENST00000419007 hCG_2014768A0A024R1R8 64 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 JCHAINP01591 159 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 SMIM18P0DKX4 95 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 ADCYAP1R1P41586 468 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 RPL5P46777 297 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 LAMC2Q13753 1193 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 CYTH1Q15438 398 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 GRIK4Q16099 956 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 NRF1Q16656 503 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 NADK2Q4G0N4 442 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 LIPMQ5VYY2 423 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 SLC41A1Q8IVJ1 513 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 LRRC52Q8N7C0 313 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 RP9Q8TA86 221 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 DGCR14Q96DF8 476 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 PKP2Q99959 881 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 SEMA6AQ9H2E6 1030 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 CDHR5Q9HBB8 845 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 POLR2AP24928 1970 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 HUS1O60921 280 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 ME2P23368 584 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 NOS2P35228 1153 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 MAP3K7CLP57077 242 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 ADGRE1Q14246 886 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 DCAF4L1Q3SXM0 396 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 PDZD4Q76G19 769 aaPredicted RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 KDELC2Q7Z4H8 507 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 LILRA2Q8N149 483 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 PCDH20Q8N6Y1 951 aaKnown RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 RNF169Q8NCN4 708 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 GTSE1Q9NYZ3 720 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 GTF2IRD1Q9UHL9 959 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 TFAP2AP05549 437 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 HOXA11P31270 313 aaPredicted RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 ZBTB17Q13105 803 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 CTBP1Q13363 440 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 ZNF423Q2M1K9 1284 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 ANO4Q32M45 955 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 OTUD1Q5VV17 481 aaPredicted RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 SLC27A1Q6PCB7 646 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 CLEC14AQ86T13 490 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 NPWQ8N729 165 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 WNT8BQ93098 351 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 DRC3Q9H069 523 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 FAM124BQ9H5Z6 455 aaPredicted RBP15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 EFCAB1Q9HAE3 211 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 TBC1D30Q9Y2I9 924 aa15.42■□□□□ 0.06
SEMA3B-203ENST00000419007 ADM5C9JUS6 153 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 GRID2O43424 1007 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 DPP6P42658 865 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 MAGEA12P43365 314 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 TKTL1P51854 596 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 PRKAA1Q13131 559 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 PIGGQ5H8A4 983 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 CRYBG2Q8N1P7 616 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 FSTL5Q8N475 847 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 B3GALNT2Q8NCR0 500 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 MLPHQ9BV36 600 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 SUDS3Q9H7L9 328 aaPredicted RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 XPR1Q9UBH6 696 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 MID2Q9UJV3 735 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 CSPG5O95196 566 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 NELFEP18615 380 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 ADRA1BP35368 520 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 DPYSQ14117 519 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 POU6F1Q14863 301 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 PAFAH1B3Q15102 231 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 MARVELD2Q8N4S9 558 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 PDCD6IPQ8WUM4 868 aaKnown RBP15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 EME1Q96AY2 570 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 TNIP3Q96KP6 325 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 PLEKHA5Q9HAU0 1116 aa15.41■□□□□ 0.06
SEMA3B-203ENST00000419007 ANLNQ9NQW6 1124 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms