RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ASCC3Q8N3C0 2202 aaKnown RBP21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 CNOT1A5YKK6 2376 aaKnown RBP21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 NCOR2Q9Y618 2525 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 C4orf47A7E2U8 309 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 ADH1BP00325 375 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 TCF4P15884 667 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 C5AR1P21730 350 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 PSMA2P25787 234 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 NNMTP40261 264 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 SERPINH1P50454 418 aaKnown RBP21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 CLCN6P51797 869 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 TDRD12Q587J7 1177 aaKnown RBP21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 WDR45BQ5MNZ6 344 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 DAB2IPQ5VWQ8 1189 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 SPECC1LQ69YQ0 1117 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 RWDD4Q6NW29 188 aaKnown RBP21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 C22orf39Q6P5X5 142 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 RTL3Q8N8U3 475 aaKnown RBP21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 ARHGEF26Q96DR7 871 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 SNRNP25Q9BV90 132 aaKnown RBP21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 KLC2Q9H0B6 622 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 DNAI1Q9UI46 699 aa21.08■□□□□ 0.97
PKNOX1-202ENST00000418336 PLXNA2O75051 1894 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 MED19A0JLT2 244 aaPredicted RBP21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 ANKRD62A6NC57 917 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 CBX4O00257 560 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 PLK4O00444 970 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 RNASEH1O60930 286 aaKnown RBP21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 GJB3O75712 270 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 CYP1A2P05177 515 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 GOT1P17174 413 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 IL1R2P27930 398 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 EFHC2Q5JST6 749 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 ATP11CQ8NB49 1132 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 CHST14Q8NCH0 376 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 TRIM11Q96F44 468 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 ATP13A1Q9HD20 1204 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 OSGEPQ9NPF4 335 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 EIF2B4Q9UI10 523 aaKnown RBP21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 SCINQ9Y6U3 715 aa21.07■□□□□ 0.96
PKNOX1-202ENST00000418336 MEI4A8MW99 385 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 RNASEH2AO75792 299 aaKnown RBP21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 IL1BP01584 269 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 EPHB2P29323 1055 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 MIPP30301 263 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 ADPRHP54922 357 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 TBX2Q13207 712 aaPredicted RBP21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 ACCSLQ4AC99 568 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 SYCP2LQ5T4T6 812 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 AGBL4Q5VU57 503 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 NCEH1Q6PIU2 408 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 RABEPKQ7Z6M1 372 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 HDDC3Q8N4P3 179 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 ZCCHC9Q8N567 271 aaKnown RBP21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 OR2I1PQ8NGU4 316 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 PIP4K2CQ8TBX8 421 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 OR8D1Q8WZ84 308 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 KCTD15Q96SI1 283 aaPredicted RBP21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 SPON2Q9BUD6 331 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 NUSAP1Q9BXS6 441 aaKnown RBP21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 CEP44Q9C0F1 390 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 MAGEH1Q9H213 219 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 LRRC19Q9H756 370 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 TMEM9BQ9NQ34 198 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 MYO1AQ9UBC5 1043 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 AP4E1Q9UPM8 1137 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 WASF2Q9Y6W5 498 aa21.06■□□□□ 0.96
PKNOX1-202ENST00000418336 A0A1B0GTW7 788 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 ARHGAP33O14559 1287 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 TAS2R38P59533 333 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 KIAA0895LQ68EN5 471 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 ALKBH5Q6P6C2 394 aaKnown RBP21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 SARM1Q6SZW1 724 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 DPY19L3Q6ZPD9 716 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 RGL4Q8IZJ4 473 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 UMODL1-AS1Q8N2C9 162 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 NIPA2Q8N8Q9 360 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 ARRDC3Q96B67 414 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 TNKS2Q9H2K2 1166 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 SUSD2Q9UGT4 822 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 PCSK1NQ9UHG2 260 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 FCF1Q9Y324 198 aaKnown RBP21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 SPEGQ15772 3267 aa21.05■□□□□ 0.96
PKNOX1-202ENST00000418336 CBFA2T2O43439 604 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 PLRG1O43660 514 aaKnown RBP21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 KDELR3O43731 214 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 CREB3O43889 395 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 CFIP05156 583 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 CHRNA3P32297 505 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 PCK1P35558 622 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 EIF4A3P38919 411 aaKnown RBP21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 SLC20A2Q08357 652 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 ERMARDQ5T6L9 678 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 PIP5KL1Q5T9C9 394 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 AFMIDQ63HM1 303 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 TMIEQ8NEW7 156 aa21.04■□□□□ 0.96
PKNOX1-202ENST00000418336 OR2T34Q8NGX1 318 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms