RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 MARK4Q96L34 752 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 SEPHS2Q99611 448 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 HMGXB4Q9UGU5 601 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 FBXO5Q9UKT4 447 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PAGE1O75459 146 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 RAP1GDS1P52306 607 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PKNOX1P55347 436 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 GRIK3Q13003 919 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 CAMK2GQ13555 558 aaPredicted RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 HIST2H2ACQ16777 129 aaPredicted RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 HIST2H2AA3Q6FI13 130 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 RIPOR1Q6ZS17 1223 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PIWIL2Q8TC59 973 aaKnown RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 CNBD2Q96M20 576 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 CAB39LQ9H9S4 337 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 SEMA4BQ9NPR2 832 aaPredicted RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 ALOX15BO15296 676 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 AHCYL1O43865 530 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 DUSP11O75319 330 aaKnown RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 FAM155BO75949 473 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PARNO95453 639 aaKnown RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 NUDT17P0C025 328 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 GRK4P32298 578 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 GPC1P35052 558 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 CCNG1P51959 295 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 CDH13P55290 713 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 WNT3AP56704 352 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 KCNJ2P63252 427 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 OCA2Q04671 838 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PTPRNQ16849 979 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 TTC7BQ86TV6 843 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 KCTD4Q8WVF5 259 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 HDAC10Q969S8 669 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 FAR2Q96K12 515 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 GMLQ99445 158 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 SNX10Q9Y5X0 201 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 BAZ2AQ9UIF9 1905 aaKnown RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 AMHP03971 560 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TPP2P29144 1249 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 CDKN2BP42772 138 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 PCID2Q5JVF3 399 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ANKRD23Q86SG2 305 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TRIM48Q8IWZ4 208 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TBC1D19Q8N5T2 526 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 KYQ8NBH2 561 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TMEM159Q96B96 161 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 RBBP8Q99708 897 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 HIPK3Q9H422 1215 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 POMKQ9H5K3 350 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TMEM165Q9HC07 324 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 MRGBPQ9NV56 204 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 SYBUQ9NX95 663 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 SH3BP4Q9P0V3 963 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 DNMT3LQ9UJW3 386 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 PCDHA2Q9Y5H9 948 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TBC1D3BA6NDS4 549 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 SYNCRIPO60506 623 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 C22orf31O95567 290 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 STAU1O95793 577 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 MPOP05164 745 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ALOX15P16050 662 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 ROR2Q01974 943 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 PCBP1Q15365 356 aaKnown RBP eCLIP13.41□□□□□ -0.26
BDNF-208ENST00000418212 ACBD5Q5T8D3 534 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 ZNF697Q5TEC3 545 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 MARK2Q7KZI7 788 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 MON1AQ86VX9 555 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 THAP11Q96EK4 314 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 NR1H4Q96RI1 486 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 ASB8Q9H765 288 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TRMT13Q9NUP7 481 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 CORO1CQ9ULV4 474 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 ZMYM2Q9UBW7 1377 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 MGAT4DA6NG13 374 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 F8W810 466 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 LCA5LO95447 670 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ITGA2BP08514 1039 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 PCNAP12004 261 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 CTPS1P17812 591 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 TFEBP19484 476 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ARL4DP49703 201 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 FBXW4P57775 412 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 NOMO1Q15155 1222 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 CCDC85BQ15834 202 aaPredicted RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 CCDC153Q494R4 210 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 DOK6Q6PKX4 331 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 ANKS3Q6ZW76 656 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 RBM23Q86U06 439 aaKnown RBP13.41□□□□□ -0.26
BDNF-208ENST00000418212 RASGEF1CQ8N431 466 aa13.41□□□□□ -0.26
BDNF-208ENST00000418212 DBF4BQ8NFT6 615 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms