RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 PDK1Q15118 436 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 P3H1Q32P28 736 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 ITPRIPL2Q3MIP1 535 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM153CQ494X1 144 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 IZUMO3Q5VZ72 239 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 KBTBD6Q86V97 674 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 UNC45BQ8IWX7 931 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 CCDC33Q8N5R6 958 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 CCNYQ8ND76 341 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 GAB3Q8WWW8 586 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 CAVIN3Q969G5 261 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 MYRFLQ96LU7 910 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM129AQ9BZQ8 928 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 SMOC1Q9H4F8 434 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 TASP1Q9H6P5 420 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 CATSPERBQ9H7T0 1116 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 TRPC7Q9HCX4 862 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZNF446Q9NWS9 450 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM153AQ9UHL3 310 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 HBS1LQ9Y450 684 aaKnown RBP13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 MFHAS1Q9Y4C4 1052 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 CEP295Q9C0D2 2601 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 NUP210Q8TEM1 1887 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 DOCK4Q8N1I0 1966 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 BCLAF3A2AJT9 711 aaKnown RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 KCNU1A8MYU2 1149 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 HACD1B0YJ81 288 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 TM4SF5O14894 197 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 PPP1R12AO14974 1030 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 DCLK1O15075 740 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 MFSD11O43934 449 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 STK10O94804 968 aaKnown RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 EPN2O95208 641 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZNF806P0C7X5 589 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 PMLP29590 882 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 TUBP50607 506 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 ITGA8P53708 1063 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 COG7P83436 770 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 AP1B1Q10567 949 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 SEMA3BQ13214 749 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 MTA1Q13330 715 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 EIF4EBP2Q13542 120 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 SLC45A4Q5BKX6 768 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 NUGGCQ68CJ6 796 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 CCDC25Q86WR0 208 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZNF276Q8N554 614 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 FBXO25Q8TCJ0 367 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 TFB1MQ8WVM0 346 aaKnown RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 SLC39A13Q96H72 371 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 LOXL4Q96JB6 756 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 BTN2A3PQ96KV6 586 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 NEUROG2Q9H2A3 272 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 IL21Q9HBE4 155 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 POLR3BQ9NW08 1133 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 GRHL1Q9NZI5 618 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 DTLQ9NZJ0 730 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 SEPT10Q9P0V9 454 aa13.49□□□□□ -0.25
HLA-DMB-258ENST00000418107 I6L893 689 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 FGF10O15520 208 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 IRF1P10914 325 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 RBL1P28749 1068 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 WEE1P30291 646 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 CDC25CP30307 473 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 HARS2P49590 506 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 RING1Q06587 406 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 DHX9Q08211 1270 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 GPS2Q13227 327 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 PAFAH1B3Q15102 231 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 STPG1Q5TH74 334 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 SNX30Q5VWJ9 437 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 FSTL4Q6MZW2 842 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 CHSY1Q86X52 802 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 TAB3Q8N5C8 712 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 MRPS31Q92665 395 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 ART4Q93070 314 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 C1orf74Q96LT6 269 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 QKIQ96PU8 341 aaKnown RBP eCLIP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 RUFY1Q96T51 708 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 SLC46A2Q9BY10 475 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 FUT8Q9BYC5 575 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 GKN1Q9NS71 199 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 TPX2Q9ULW0 747 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 NEU2Q9Y3R4 380 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 HS3ST4Q9Y661 456 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 KIF26AQ9ULI4 1882 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 FRYQ5TBA9 3013 aa13.48□□□□□ -0.25
HLA-DMB-258ENST00000418107 OTOL1A6NHN0 477 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 E9PAM4 449 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 DNALI1O14645 258 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 COCHO43405 550 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZNF189O75820 626 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 MBL2P11226 248 aaPredicted RBP13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 MX2P20592 715 aa13.47□□□□□ -0.25
HLA-DMB-258ENST00000418107 IVDP26440 423 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms