RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TMIEQ8NEW7 156 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 NEK11Q8NG66 645 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 PCMTD1Q96MG8 357 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 ZYG11BQ9C0D3 744 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 GDF3Q9NR23 364 aa18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 PPARGC1AQ9UBK2 798 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-208ENST00000416159 YKT6O15498 198 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 TNFSF14O43557 240 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 CDK11BP21127 795 aaKnown RBP18■□□□□ 0.47
PDLIM2-208ENST00000416159 SDC4P31431 198 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 CHRNA3P32297 505 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 MYL5Q02045 173 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 SLC20A2Q08357 652 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 SYCP1Q15431 976 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 STX1AQ16623 288 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 ARTNQ5T4W7 220 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 AGBL4Q5VU57 503 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 RETSATQ6NUM9 610 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 TRIM69Q86WT6 500 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 MFSD2AQ8NA29 543 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 OR2A12Q8NGT7 310 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 SLC30A5Q8TAD4 765 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 RXFP2Q8WXD0 754 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 C11orf70Q9BRQ4 267 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 RETREG1Q9H6L5 497 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 ARHGAP20Q9P2F6 1191 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 DMTF1Q9Y222 760 aa18■□□□□ 0.47
PDLIM2-208ENST00000416159 TP53BP1Q12888 1972 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 LRRC10BA6NIK2 292 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 LGALS16A8MUM7 142 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 K7ERQ8 282 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 TLR4O00206 839 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 WNT9AO14904 365 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 SMAD6O43541 496 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 MAGEC1O60732 1142 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 PRNPP04156 253 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 ATXN1LP0C7T5 689 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 UNGP13051 313 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 RRM1P23921 792 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 ADRA1BP35368 520 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 PTPN9P43378 593 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 RECQLP46063 649 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 NSFP46459 744 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 IL9RQ01113 521 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 NRG1Q02297 640 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 UBXN1Q04323 297 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 POM121L1PQ3SYA9 428 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 CCDC14Q49A88 953 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 STRADAQ7RTN6 431 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 IQCHQ86VS3 1027 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 OR7D4Q8NG98 312 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 ZCCHC14Q8WYQ9 949 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 SPON2Q9BUD6 331 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 PREBQ9HCU5 417 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 DYRK4Q9NR20 520 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 TOR4AQ9NXH8 423 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 ZNF212Q9UDV6 495 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 DOCK9Q9BZ29 2069 aa17.99■□□□□ 0.47
PDLIM2-208ENST00000416159 C2CD4BA6NLJ0 364 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 CBX4O00257 560 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 DKK1O94907 266 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 ITGAVP06756 1048 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 CTSLP07711 333 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 KRT3P12035 628 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 MAT2AP31153 395 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 ETFBP38117 255 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 ARRB1P49407 418 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 GSCP56915 257 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 NXPH1P58417 271 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 GNA12Q03113 381 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 OVGP1Q12889 678 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 CDO1Q16878 200 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 C15orf59Q2T9L4 293 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 SETMARQ53H47 684 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 PRAMEF14Q5SWL7 426 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 NEK5Q6P3R8 708 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 C22orf39Q6P5X5 142 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 LINGO4Q6UY18 593 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 CCNI2Q6ZMN8 369 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 PHLDB2Q86SQ0 1253 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 OXR1Q8N573 874 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 ERGIC2Q96RQ1 377 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 CEP44Q9C0F1 390 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 OSBPL2Q9H1P3 480 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 ERVMER34-1Q9H9K5 563 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 ATP13A1Q9HD20 1204 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 ADAM22Q9P0K1 906 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 OR12D3Q9UGF7 316 aa17.98■□□□□ 0.47
PDLIM2-208ENST00000416159 CXorf51AA0A1B0GTR3 108 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 PRAMEF26H0Y7S4 382 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 KPNA3O00505 521 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 RNGTTO60942 597 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 ZMPSTE24O75844 475 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 MBD3O95983 291 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 CALB1P05937 261 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 GLDCP23378 1020 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 RXRGP48443 463 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 PTP4A2Q12974 167 aa17.97■□□□□ 0.47
PDLIM2-208ENST00000416159 STAT4Q14765 748 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms