RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
PRAMEF9-201ENST00000415919 CDC42EP4Q9H3Q1 356 aaKnown RBP12.81□□□□□ -0.36
PRAMEF9-201ENST00000415919 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
PRAMEF9-201ENST00000415919 LMCD1Q9NZU5 365 aa12.81□□□□□ -0.36
PRAMEF9-201ENST00000415919 PLAAQ9Y263 795 aa12.81□□□□□ -0.36
PRAMEF9-201ENST00000415919 NOTCH4Q99466 2003 aa12.81□□□□□ -0.36
PRAMEF9-201ENST00000415919 GOLGA6CA6NDK9 693 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 KDELR3O43731 214 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 KIF1CO43896 1103 aaKnown RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 PRAMEF11O60813 436 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 HLA-DQB2P05538 268 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 GOLGA6DP0CG33 693 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 HOXB8P17481 243 aaPredicted RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 MMP13P45452 471 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 CDK16Q00536 496 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 SLC10A7Q0GE19 358 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 USP4Q13107 963 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 GPS2Q13227 327 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ADAM15Q13444 863 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 LBRQ14739 615 aaKnown RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 MPP7Q5T2T1 576 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ICE2Q659A1 982 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 SYCE2Q6PIF2 218 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ZNF783Q6ZMS7 281 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 OTOP3Q7RTS5 596 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ZBED8Q8IZ13 594 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 MCUQ8NE86 351 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 C9orf72Q96LT7 481 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 GLOD4Q9HC38 313 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 NT5MQ9NPB1 228 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 GOLGA6AQ9NYA3 693 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 CDH22Q9UJ99 828 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 SHROOM3Q8TF72 1996 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 NYNRINQ9P2P1 1898 aaKnown RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 CBX4O00257 560 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 SLC9A3R1O14745 358 aaPredicted RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 EIF3HO15372 352 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 PSMD3O43242 534 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 RIPK2O43353 540 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 BANF1O75531 89 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ACSL3O95573 720 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 PEX11BO96011 259 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 TCF3P15923 654 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 KYNUQ16719 465 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 LRIT3Q3SXY7 679 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ATAT1Q5SQI0 421 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 TMCO4Q5TGY1 634 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 CES5AQ6NT32 575 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ANKMY2Q8IV38 441 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 NPAS3Q8IXF0 933 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 BBS5Q8N3I7 341 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 UHMK1Q8TAS1 419 aaKnown RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 PYROXD1Q8WU10 500 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 FGF13Q92913 245 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 ZNF599Q96NL3 588 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 SERPINB12Q96P63 405 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 LINC00597Q9H2U6 94 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 EIF2B3Q9NR50 452 aaKnown RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 NINJ2Q9NZG7 142 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 UBP1Q9NZI7 540 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 VPS28Q9UK41 221 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 AAR2Q9Y312 384 aaKnown RBP12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 WNT6Q9Y6F9 365 aa12.8□□□□□ -0.36
PRAMEF9-201ENST00000415919 TRANK1O15050 2925 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 HELZP42694 1942 aaKnown RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 ALOX15BO15296 676 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 AVILO75366 819 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 ANXA9O76027 345 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 TTC4O95801 387 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 GLDCP23378 1020 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 HOXD9P28356 352 aaPredicted RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 MZF1P28698 734 aaPredicted RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 WEE1P30291 646 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 CSKP41240 450 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 SPARCL1Q14515 664 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 ZNF235Q14590 738 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 MSS51Q4VC12 460 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 FAM78AQ5JUQ0 283 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 TMEM25Q86YD3 366 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 RELL1Q8IUW5 271 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 IQCKQ8N0W5 287 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 WFDC5Q8TCV5 224 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 OTUB2Q96DC9 234 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 PPP1R2P1Q96PQ5 205 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 FCRL5Q96RD9 977 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 ACE2Q9BYF1 805 aaPredicted RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 XAB2Q9HCS7 855 aaKnown RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 HAUS2Q9NVX0 235 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 CLDND1Q9NY35 253 aa12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 TNRC18O15417 2968 aaPredicted RBP12.79□□□□□ -0.36
PRAMEF9-201ENST00000415919 LAMA3Q16787 3333 aa12.78□□□□□ -0.36
PRAMEF9-201ENST00000415919 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms