RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 IPO11Q9UI26 975 aaKnown RBP16.2■□□□□ 0.18
CPNE1-208ENST00000414711 RABGEF1Q9UJ41 708 aa16.2■□□□□ 0.18
CPNE1-208ENST00000414711 ZFR2Q9UPR6 939 aaKnown RBP16.2■□□□□ 0.18
CPNE1-208ENST00000414711 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-208ENST00000414711 OTOGQ6ZRI0 2925 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 H3BQV1 296 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 ZNF18P17022 549 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 COL8A1P27658 744 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 RABIFP47224 123 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 ATP1A2P50993 1020 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 MAPK10P53779 464 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 MLLT10P55197 1068 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 CCL7P80098 99 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 CUL4AQ13619 759 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 PDE1CQ14123 709 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 LACTB2Q53H82 288 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 CAPRIN2Q6IMN6 1127 aaKnown RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 ESRP1Q6NXG1 681 aaKnown RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 RBFAQ8N0V3 343 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 SDR16C5Q8N3Y7 309 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 TMEM159Q96B96 161 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 CATSPER2Q96P56 530 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 CPEB1Q9BZB8 566 aaKnown RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 NUCKS1Q9H1E3 243 aaKnown RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 CYP3A43Q9HB55 503 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 APOBEC3BQ9UH17 382 aaKnown RBP16.19■□□□□ 0.18
CPNE1-208ENST00000414711 HS3ST3A1Q9Y663 406 aa16.19■□□□□ 0.18
CPNE1-208ENST00000414711 F8P00451 2351 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 A0A1W2PQM1 296 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 YJEFN3A6XGL0 299 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 E7ENQ6 273 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 LMO7DNF2Z398 122 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 STMND1H3BQB6 276 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 MCF2LO15068 1137 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 GCATO75600 419 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 PCDH8O95206 1070 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 ANXA6P08133 673 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 GNLYP22749 145 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 ADKP55263 362 aaKnown RBP16.18■□□□□ 0.18
CPNE1-208ENST00000414711 SLC8A3P57103 927 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 ADIGQ0VDE8 80 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 KLRB1Q12918 225 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 ACCSLQ4AC99 568 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 TMEM259Q4ZIN3 620 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 ZNF394Q53GI3 561 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 PRRT3Q5FWE3 981 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 MS4A13Q5J8X5 152 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 TPRG1LQ5T0D9 272 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 MSANTD2Q6P1R3 559 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 Q6ZVU0 165 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 C12orf56Q8IXR9 622 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 SRRM1Q8IYB3 904 aaKnown RBP16.18■□□□□ 0.18
CPNE1-208ENST00000414711 BTN2A2Q8WVV5 523 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 AZIN2Q96A70 460 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 INTS4Q96HW7 963 aaKnown RBP16.18■□□□□ 0.18
CPNE1-208ENST00000414711 HEXIM2Q96MH2 286 aaKnown RBP16.18■□□□□ 0.18
CPNE1-208ENST00000414711 ABCC13Q9NSE7 274 aa16.18■□□□□ 0.18
CPNE1-208ENST00000414711 CUEDC1Q9NWM3 386 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-208ENST00000414711 SETD2Q9BYW2 2564 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-208ENST00000414711 PRR19A6NJB7 356 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 SPINT1O43278 529 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 SEMA7AO75326 666 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 VPS4BO75351 444 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 HLA-DRAP01903 254 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 LIFP15018 202 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 DLG4P78352 724 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 SULT2A1Q06520 285 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 CCDC15Q0P6D6 951 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 EIF2B5Q13144 721 aaKnown RBP16.17■□□□□ 0.18
CPNE1-208ENST00000414711 C1orf61Q13536 156 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 FGL2Q14314 439 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 DCAF6Q58WW2 860 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 MAMDC2Q7Z304 686 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-208ENST00000414711 ARL10Q8N8L6 244 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 KYQ8NBH2 561 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 ABHD17AQ96GS6 310 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 CMKLR1Q99788 373 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 LRRC61Q9BV99 259 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 IMPG2Q9BZV3 1241 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 TCEAL2Q9H3H9 227 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-208ENST00000414711 LRRC4Q9HBW1 653 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 APOBEC3GQ9HC16 384 aaKnown RBP16.17■□□□□ 0.18
CPNE1-208ENST00000414711 TFIP11Q9UBB9 837 aaKnown RBP16.17■□□□□ 0.18
CPNE1-208ENST00000414711 VPS4AQ9UN37 437 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 MED13Q9UHV7 2174 aa16.17■□□□□ 0.18
CPNE1-208ENST00000414711 TULP2O00295 520 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 RAD51BO15315 384 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 BNIP3LO60238 219 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 PRKCGP05129 697 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 TBX4P57082 545 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 FAM26FQ5R3K3 315 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 SV2AQ7L0J3 742 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 SIX6OS1Q8N1H7 587 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 NKD1Q969G9 470 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 NIF3L1Q9GZT8 377 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 LRRN3Q9H3W5 708 aa16.16■□□□□ 0.18
CPNE1-208ENST00000414711 SIRPGQ9P1W8 387 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms