RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 EFHD1Q9BUP0 239 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 THUMPD3Q9BV44 507 aaKnown RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 BTBD2Q9BX70 525 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 TDRD1Q9BXT4 1180 aaKnown RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 SHCBP1LQ9BZQ2 653 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 YIPF3Q9GZM5 350 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 PITHD1Q9GZP4 211 aaPredicted RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 RHBGQ9H310 441 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 JMJD4Q9H9V9 463 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 UCK1Q9HA47 277 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 C17orf75Q9HAS0 396 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 C12orf10Q9HB07 376 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 SPACA1Q9HBV2 294 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 MRM3Q9HC36 420 aaKnown RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 VCX3AQ9NNX9 186 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 SSU72Q9NP77 194 aaKnown RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 PNPLA8Q9NP80 782 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 GALNT8Q9NY28 637 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 EURLQ9NYK6 297 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 TMOD2Q9NZR1 351 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 STX18Q9P2W9 335 aaKnown RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 SUCOQ9UBS9 1254 aaKnown RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 LCMT1Q9UIC8 334 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 ZMYM5Q9UJ78 669 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 PACSIN2Q9UNF0 486 aaPredicted RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 SIK3Q9Y2K2 1263 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 PCDHB6Q9Y5E3 794 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 PCDHGB2Q9Y5G2 931 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 PCDHGA3Q9Y5H0 932 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 CACNA1HO95180 2353 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 RLFQ13129 1914 aa4.05□□□□□ -1.76
LINC01048-201ENST00000414480 PRRC2BQ5JSZ5 2229 aaKnown RBP4.05□□□□□ -1.76
LINC01048-201ENST00000414480 LRRC37A2A6NM11 1700 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 TPRP12270 2363 aaKnown RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ELP1O95163 1332 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 DNAJC25-GNG10A0A024R161 153 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 A0A087WV62 115 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 LOC100506127A0A0U1RQW1 187 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 RNF103-CHMP3A0A140T963 221 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 LOC105371267A0A1B0GV96 52 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 PI4KAP2A4QPH2 592 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CAPN8A6NHC0 703 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 FAM47DPA6NHR8 397 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 PCP4L1A6NKN8 68 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 NOTOA8MTQ0 251 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 FOXO6A8MYZ6 492 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 B2RBV5 119 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 NPIPB6E9PJ23 425 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 RNF103O00237 685 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 KMOO15229 486 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CHMP2AO43633 222 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SYNCRIPO60506 623 aaKnown RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 GMNNO75496 209 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SOAT2O75908 522 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 F13A1P00488 732 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 KRT6AP02538 564 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CSTBP04080 98 aaKnown RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 KRT6BP04259 564 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 PCCAP05165 728 aaPredicted RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 URODP06132 367 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 RB1P06400 928 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ANXA6P08133 673 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 USP17L7P0C7H9 530 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 GNAT1P11488 350 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ANPEPP15144 967 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CHN1P15882 459 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CTRB1P17538 263 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SLC9A1P19634 815 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SDSP20132 328 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CYP2B6P20813 491 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 PDCP20941 246 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CHMP24386 653 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 MC4RP32245 332 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SLC8A1P32418 973 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CIITAP33076 1130 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 DPP6P42658 865 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CRKP46108 304 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ID4P47928 161 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SOX9P48436 509 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 DHPSP49366 369 aaPredicted RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 AARSP49588 968 aaKnown RBP eCLIP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 USP14P54578 494 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ATP12AP54707 1039 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ADARP55265 1226 aaKnown RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 YWHAHQ04917 246 aaPredicted RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CHAF1BQ13112 559 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ZNF177Q13360 481 aaPredicted RBP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 KCNC3Q14003 757 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 GIT2Q14161 759 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 E2F2Q14209 437 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 PCBP2Q15366 365 aaKnown RBP eCLIP4.04□□□□□ -1.76
LINC01048-201ENST00000414480 TSC22D1Q15714 1073 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 KCNA10Q16322 511 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 CCL14Q16627 93 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SMU1Q2TAY7 513 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 KLHL38Q2WGJ6 581 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 SLC10A6Q3KNW5 377 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ANKRD20A4Q4UJ75 823 aa4.04□□□□□ -1.76
LINC01048-201ENST00000414480 ANKRD20A8PQ5CZ79 823 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms